RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CFAP74Q9C0B2 1584 aa19.2■□□□□ 0.66
HIF3A-202ENST00000244303 ZMYM4Q5VZL5 1548 aa19.19■□□□□ 0.66
HIF3A-202ENST00000244303 POGZQ7Z3K3 1410 aa19.19■□□□□ 0.66
HIF3A-202ENST00000244303 INSRP06213 1382 aa19.17■□□□□ 0.66
HIF3A-202ENST00000244303 CDCA7LQ96GN5 454 aa19.17■□□□□ 0.66
HIF3A-202ENST00000244303 MLH3Q9UHC1 1453 aa19.16■□□□□ 0.66
HIF3A-202ENST00000244303 EXOC6Q8TAG9 804 aa19.15■□□□□ 0.66
HIF3A-202ENST00000244303 SCAF11Q99590 1463 aaKnown RBP19.15■□□□□ 0.66
HIF3A-202ENST00000244303 SYNMO15061 1565 aa19.15■□□□□ 0.66
HIF3A-202ENST00000244303 EFCAB6Q5THR3 1501 aa19.14■□□□□ 0.65
HIF3A-202ENST00000244303 MYOM1P52179 1685 aa19.13■□□□□ 0.65
HIF3A-202ENST00000244303 LMTK2Q8IWU2 1503 aa19.13■□□□□ 0.65
HIF3A-202ENST00000244303 KIAA1210Q9ULL0 1709 aa19.13■□□□□ 0.65
HIF3A-202ENST00000244303 NEURL4Q96JN8 1562 aa19.12■□□□□ 0.65
HIF3A-202ENST00000244303 UGGT1Q9NYU2 1555 aa19.11■□□□□ 0.65
HIF3A-202ENST00000244303 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
HIF3A-202ENST00000244303 KNSTRNQ9Y448 316 aa19.11■□□□□ 0.65
HIF3A-202ENST00000244303 HECW2Q9P2P5 1572 aa19.11■□□□□ 0.65
HIF3A-202ENST00000244303 FRMPD1Q5SYB0 1578 aa19.1■□□□□ 0.65
HIF3A-202ENST00000244303 NEO1Q92859 1461 aa19.1■□□□□ 0.65
HIF3A-202ENST00000244303 KIF1BO60333 1816 aa19.09■□□□□ 0.65
HIF3A-202ENST00000244303 KDM5AP29375 1690 aaKnown RBP19.09■□□□□ 0.65
HIF3A-202ENST00000244303 CDCA8Q53HL2 280 aa19.08■□□□□ 0.65
HIF3A-202ENST00000244303 GGT6Q6P531 493 aa19.08■□□□□ 0.65
HIF3A-202ENST00000244303 RAPGEF3O95398 923 aa19.08■□□□□ 0.64
HIF3A-202ENST00000244303 PPP2R1AP30153 589 aa19.08■□□□□ 0.64
HIF3A-202ENST00000244303 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.64
HIF3A-202ENST00000244303 ADAMTS8Q9UP79 889 aa19.08■□□□□ 0.64
HIF3A-202ENST00000244303 MAP3K4Q9Y6R4 1608 aa19.07■□□□□ 0.64
HIF3A-202ENST00000244303 ASXL1Q8IXJ9 1541 aa19.07■□□□□ 0.64
HIF3A-202ENST00000244303 ABCA6Q8N139 1617 aa19.06■□□□□ 0.64
HIF3A-202ENST00000244303 EIF3AQ14152 1382 aaKnown RBP19.06■□□□□ 0.64
HIF3A-202ENST00000244303 IFT172Q9UG01 1749 aa19.05■□□□□ 0.64
HIF3A-202ENST00000244303 MYOM2P54296 1465 aa19.05■□□□□ 0.64
HIF3A-202ENST00000244303 ADGRF5Q8IZF2 1346 aa19.05■□□□□ 0.64
HIF3A-202ENST00000244303 MROH2AA6NES4 1674 aa19.04■□□□□ 0.64
HIF3A-202ENST00000244303 PLIN1O60240 522 aa19.04■□□□□ 0.64
HIF3A-202ENST00000244303 CYB5RLQ6IPT4 315 aa19.04■□□□□ 0.64
HIF3A-202ENST00000244303 CFAP70Q5T0N1 1121 aa19.03■□□□□ 0.64
HIF3A-202ENST00000244303 NPATQ14207 1427 aa19.03■□□□□ 0.64
HIF3A-202ENST00000244303 WDR43Q15061 677 aaKnown RBP eCLIP19.03■□□□□ 0.64
HIF3A-202ENST00000244303 NOP58Q9Y2X3 529 aaKnown RBP19.03■□□□□ 0.64
HIF3A-202ENST00000244303 PIK3C2GO75747 1445 aa19■□□□□ 0.63
HIF3A-202ENST00000244303 PLEKHH1Q9ULM0 1364 aa19■□□□□ 0.63
HIF3A-202ENST00000244303 CHGAP10645 457 aaKnown RBP19■□□□□ 0.63
HIF3A-202ENST00000244303 ANP32AP39687 249 aaKnown RBP19■□□□□ 0.63
HIF3A-202ENST00000244303 ABCC3O15438 1527 aa19■□□□□ 0.63
HIF3A-202ENST00000244303 ERVK-7P63135 1459 aa18.99■□□□□ 0.63
HIF3A-202ENST00000244303 NPC1L1Q9UHC9 1359 aa18.99■□□□□ 0.63
HIF3A-202ENST00000244303 ADGRB3O60242 1522 aa18.99■□□□□ 0.63
HIF3A-202ENST00000244303 DIP2CQ9Y2E4 1556 aa18.98■□□□□ 0.63
HIF3A-202ENST00000244303 PAK3O75914 559 aaPredicted RBP18.98■□□□□ 0.63
HIF3A-202ENST00000244303 CRBNQ96SW2 442 aa18.98■□□□□ 0.63
HIF3A-202ENST00000244303 NRXN1Q9ULB1 1477 aa18.98■□□□□ 0.63
HIF3A-202ENST00000244303 CFAP65Q6ZU64 1925 aaKnown RBP18.98■□□□□ 0.63
HIF3A-202ENST00000244303 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
HIF3A-202ENST00000244303 IPO9Q96P70 1041 aaKnown RBP18.97■□□□□ 0.63
HIF3A-202ENST00000244303 NOS1P29475 1434 aa18.96■□□□□ 0.63
HIF3A-202ENST00000244303 RICTORQ6R327 1708 aa18.96■□□□□ 0.63
HIF3A-202ENST00000244303 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
HIF3A-202ENST00000244303 GLI2P10070 1586 aa18.96■□□□□ 0.62
HIF3A-202ENST00000244303 ZNF521Q96K83 1311 aa18.95■□□□□ 0.62
HIF3A-202ENST00000244303 DUSP27Q5VZP5 1158 aa18.95■□□□□ 0.62
HIF3A-202ENST00000244303 CAMSAP1Q5T5Y3 1602 aa18.93■□□□□ 0.62
HIF3A-202ENST00000244303 C20orf194Q5TEA3 1177 aa18.93■□□□□ 0.62
HIF3A-202ENST00000244303 YEATS2Q9ULM3 1422 aa18.92■□□□□ 0.62
HIF3A-202ENST00000244303 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
HIF3A-202ENST00000244303 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
HIF3A-202ENST00000244303 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
HIF3A-202ENST00000244303 SLC24A1O60721 1099 aa18.92■□□□□ 0.62
HIF3A-202ENST00000244303 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
HIF3A-202ENST00000244303 RPGRIP1LQ68CZ1 1315 aa18.91■□□□□ 0.62
HIF3A-202ENST00000244303 CCDC146Q8IYE0 955 aa18.91■□□□□ 0.62
HIF3A-202ENST00000244303 PPLO60437 1756 aa18.91■□□□□ 0.62
HIF3A-202ENST00000244303 PDE4AP27815 886 aa18.9■□□□□ 0.62
HIF3A-202ENST00000244303 FAM69CQ0P6D2 419 aa18.9■□□□□ 0.62
HIF3A-202ENST00000244303 CARD14Q9BXL6 1004 aa18.9■□□□□ 0.62
HIF3A-202ENST00000244303 C14orf93Q9H972 538 aaKnown RBP18.9■□□□□ 0.62
HIF3A-202ENST00000244303 SIGLEC1Q9BZZ2 1709 aa18.9■□□□□ 0.62
HIF3A-202ENST00000244303 MS4A1P11836 297 aa18.89■□□□□ 0.61
HIF3A-202ENST00000244303 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
HIF3A-202ENST00000244303 ZBTB47Q9UFB7 747 aaPredicted RBP18.89■□□□□ 0.61
HIF3A-202ENST00000244303 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
HIF3A-202ENST00000244303 ARHGAP31Q2M1Z3 1444 aa18.88■□□□□ 0.61
HIF3A-202ENST00000244303 DEKP35659 375 aaKnown RBP18.88■□□□□ 0.61
HIF3A-202ENST00000244303 BACH2Q9BYV9 841 aa18.88■□□□□ 0.61
HIF3A-202ENST00000244303 SBNO2Q9Y2G9 1366 aa18.87■□□□□ 0.61
HIF3A-202ENST00000244303 SLFN5Q08AF3 891 aa18.87■□□□□ 0.61
HIF3A-202ENST00000244303 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
HIF3A-202ENST00000244303 QRICH2Q9H0J4 1663 aa18.87■□□□□ 0.61
HIF3A-202ENST00000244303 SKAP1Q86WV1 359 aa18.86■□□□□ 0.61
HIF3A-202ENST00000244303 PIK3C2BO00750 1634 aa18.86■□□□□ 0.61
HIF3A-202ENST00000244303 APAF1O14727 1248 aa18.85■□□□□ 0.61
HIF3A-202ENST00000244303 NBR1Q14596 966 aa18.85■□□□□ 0.61
HIF3A-202ENST00000244303 CENPJQ9HC77 1338 aaPredicted RBP18.85■□□□□ 0.61
HIF3A-202ENST00000244303 TRAK1Q9UPV9 953 aa18.84■□□□□ 0.61
HIF3A-202ENST00000244303 DIP2BQ9P265 1576 aa18.84■□□□□ 0.61
HIF3A-202ENST00000244303 TRMT2AQ8IZ69 625 aaKnown RBP18.84■□□□□ 0.61
HIF3A-202ENST00000244303 IDI1Q13907 227 aa18.83■□□□□ 0.61
HIF3A-202ENST00000244303 TMEM132EQ6IEE7 984 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms