RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 TNRQ92752 1358 aa18.19■□□□□ 0.5
HIF3A-201ENST00000244302 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
HIF3A-201ENST00000244302 TMEM131LA2VDJ0 1609 aa18.18■□□□□ 0.5
HIF3A-201ENST00000244302 TRPM1Q7Z4N2 1603 aa18.18■□□□□ 0.5
HIF3A-201ENST00000244302 MADDQ8WXG6 1647 aa18.18■□□□□ 0.5
HIF3A-201ENST00000244302 FER1L4A9Z1Z3 1794 aa18.17■□□□□ 0.5
HIF3A-201ENST00000244302 WASHC2AQ641Q2 1341 aa18.17■□□□□ 0.5
HIF3A-201ENST00000244302 C3P01024 1663 aa18.15■□□□□ 0.5
HIF3A-201ENST00000244302 A2ML1A8K2U0 1454 aa18.15■□□□□ 0.5
HIF3A-201ENST00000244302 NEXMIFQ5QGS0 1516 aa18.15■□□□□ 0.5
HIF3A-201ENST00000244302 NEURL4Q96JN8 1562 aa18.15■□□□□ 0.5
HIF3A-201ENST00000244302 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.49
HIF3A-201ENST00000244302 IFT172Q9UG01 1749 aa18.14■□□□□ 0.49
HIF3A-201ENST00000244302 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.49
HIF3A-201ENST00000244302 PPLO60437 1756 aa18.13■□□□□ 0.49
HIF3A-201ENST00000244302 MYOM2P54296 1465 aa18.13■□□□□ 0.49
HIF3A-201ENST00000244302 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
HIF3A-201ENST00000244302 VGFO15240 615 aaPredicted RBP18.13■□□□□ 0.49
HIF3A-201ENST00000244302 POLR3GLQ9BT43 218 aa18.13■□□□□ 0.49
HIF3A-201ENST00000244302 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
HIF3A-201ENST00000244302 C14orf93Q9H972 538 aaKnown RBP18.12■□□□□ 0.49
HIF3A-201ENST00000244302 NRXN1Q9ULB1 1477 aa18.12■□□□□ 0.49
HIF3A-201ENST00000244302 MIER1Q8N108 512 aa18.11■□□□□ 0.49
HIF3A-201ENST00000244302 STAC3Q96MF2 364 aa18.11■□□□□ 0.49
HIF3A-201ENST00000244302 PIK3C2GO75747 1445 aa18.11■□□□□ 0.49
HIF3A-201ENST00000244302 LTKP29376 864 aa18.1■□□□□ 0.49
HIF3A-201ENST00000244302 KIF7Q2M1P5 1343 aa18.09■□□□□ 0.49
HIF3A-201ENST00000244302 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
HIF3A-201ENST00000244302 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
HIF3A-201ENST00000244302 RIMS2Q9UQ26 1411 aa18.09■□□□□ 0.49
HIF3A-201ENST00000244302 TESK2Q96S53 571 aa18.07■□□□□ 0.48
HIF3A-201ENST00000244302 STK26Q9P289 416 aa18.07■□□□□ 0.48
HIF3A-201ENST00000244302 CCDC7Q96M83 1385 aa18.05■□□□□ 0.48
HIF3A-201ENST00000244302 ZFYVE9O95405 1425 aa18.04■□□□□ 0.48
HIF3A-201ENST00000244302 TMEM2Q9UHN6 1383 aa18.04■□□□□ 0.48
HIF3A-201ENST00000244302 KDM4FA0A1W2PPD8 638 aa18.02■□□□□ 0.48
HIF3A-201ENST00000244302 TXNDC2Q86VQ3 553 aa18.02■□□□□ 0.48
HIF3A-201ENST00000244302 BCANQ96GW7 911 aa18.02■□□□□ 0.48
HIF3A-201ENST00000244302 UBR1Q8IWV7 1749 aa18.02■□□□□ 0.48
HIF3A-201ENST00000244302 SAFB2Q14151 953 aaKnown RBP eCLIP18.02■□□□□ 0.47
HIF3A-201ENST00000244302 DISP3Q9P2K9 1392 aa18.02■□□□□ 0.47
HIF3A-201ENST00000244302 ADGRB1O14514 1584 aa18.01■□□□□ 0.47
HIF3A-201ENST00000244302 SCAF11Q99590 1463 aaKnown RBP18.01■□□□□ 0.47
HIF3A-201ENST00000244302 PTPRMP28827 1452 aa18■□□□□ 0.47
HIF3A-201ENST00000244302 NLRP1Q9C000 1473 aa18■□□□□ 0.47
HIF3A-201ENST00000244302 SLC26A8Q96RN1 970 aa17.99■□□□□ 0.47
HIF3A-201ENST00000244302 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
HIF3A-201ENST00000244302 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
HIF3A-201ENST00000244302 METP08581 1390 aa17.97■□□□□ 0.47
HIF3A-201ENST00000244302 THEMISQ8N1K5 641 aaPredicted RBP17.97■□□□□ 0.47
HIF3A-201ENST00000244302 KIAA1210Q9ULL0 1709 aa17.97■□□□□ 0.47
HIF3A-201ENST00000244302 IQGAP1P46940 1657 aa17.97■□□□□ 0.47
HIF3A-201ENST00000244302 LAMC1P11047 1609 aa17.96■□□□□ 0.47
HIF3A-201ENST00000244302 ALKQ9UM73 1620 aa17.96■□□□□ 0.47
HIF3A-201ENST00000244302 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.96■□□□□ 0.47
HIF3A-201ENST00000244302 MYO3AQ8NEV4 1616 aa17.96■□□□□ 0.46
HIF3A-201ENST00000244302 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
HIF3A-201ENST00000244302 NRXN3Q9Y4C0 1643 aa17.93■□□□□ 0.46
HIF3A-201ENST00000244302 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
HIF3A-201ENST00000244302 CENPJQ9HC77 1338 aaPredicted RBP17.92■□□□□ 0.46
HIF3A-201ENST00000244302 CEP170BQ9Y4F5 1589 aaPredicted RBP17.92■□□□□ 0.46
HIF3A-201ENST00000244302 SETBP1Q9Y6X0 1596 aa17.92■□□□□ 0.46
HIF3A-201ENST00000244302 HDGFP51858 240 aaKnown RBP17.92■□□□□ 0.46
HIF3A-201ENST00000244302 TMF1P82094 1093 aa17.92■□□□□ 0.46
HIF3A-201ENST00000244302 PRAM1Q96QH2 718 aa17.92■□□□□ 0.46
HIF3A-201ENST00000244302 ADAMTS13Q76LX8 1427 aa17.91■□□□□ 0.46
HIF3A-201ENST00000244302 YTHDC2Q9H6S0 1430 aaKnown RBP17.91■□□□□ 0.46
HIF3A-201ENST00000244302 ARHGAP23Q9P227 1491 aa17.9■□□□□ 0.46
HIF3A-201ENST00000244302 PLEKHH1Q9ULM0 1364 aa17.9■□□□□ 0.46
HIF3A-201ENST00000244302 SETD1BQ9UPS6 1966 aaKnown RBP17.88■□□□□ 0.45
HIF3A-201ENST00000244302 MINK1Q8N4C8 1332 aaPredicted RBP17.88■□□□□ 0.45
HIF3A-201ENST00000244302 HSPA2P54652 639 aa17.88■□□□□ 0.45
HIF3A-201ENST00000244302 SLIT1O75093 1534 aa17.88■□□□□ 0.45
HIF3A-201ENST00000244302 EIF3AQ14152 1382 aaKnown RBP17.88■□□□□ 0.45
HIF3A-201ENST00000244302 KDM5AP29375 1690 aaKnown RBP17.88■□□□□ 0.45
HIF3A-201ENST00000244302 PLEKHG1Q9ULL1 1385 aa17.87■□□□□ 0.45
HIF3A-201ENST00000244302 NCKAP5LQ9HCH0 1330 aa17.87■□□□□ 0.45
HIF3A-201ENST00000244302 GTF3C3Q9Y5Q9 886 aa17.87■□□□□ 0.45
HIF3A-201ENST00000244302 SETD1AO15047 1707 aaKnown RBP17.86■□□□□ 0.45
HIF3A-201ENST00000244302 POGKQ9P215 609 aa17.86■□□□□ 0.45
HIF3A-201ENST00000244302 ANKLE2Q86XL3 938 aa17.84■□□□□ 0.45
HIF3A-201ENST00000244302 PANK3Q9H999 370 aa17.84■□□□□ 0.45
HIF3A-201ENST00000244302 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
HIF3A-201ENST00000244302 PTPRUQ92729 1446 aa17.84■□□□□ 0.45
HIF3A-201ENST00000244302 LRPPRCP42704 1394 aaKnown RBP17.83■□□□□ 0.45
HIF3A-201ENST00000244302 POLR1AO95602 1720 aaPredicted RBP17.83■□□□□ 0.44
HIF3A-201ENST00000244302 ARHGEF28Q8N1W1 1705 aaKnown RBP17.83■□□□□ 0.44
HIF3A-201ENST00000244302 RBM33Q96EV2 1170 aaKnown RBP17.83■□□□□ 0.44
HIF3A-201ENST00000244302 MED14O60244 1454 aa17.82■□□□□ 0.44
HIF3A-201ENST00000244302 ANP32CO43423 234 aa17.81■□□□□ 0.44
HIF3A-201ENST00000244302 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
HIF3A-201ENST00000244302 ROBO2Q9HCK4 1378 aa17.81■□□□□ 0.44
HIF3A-201ENST00000244302 SLC12A5Q9H2X9 1139 aa17.81■□□□□ 0.44
HIF3A-201ENST00000244302 ABCC11Q96J66 1382 aa17.8■□□□□ 0.44
HIF3A-201ENST00000244302 TBX22Q9Y458 520 aa17.8■□□□□ 0.44
HIF3A-201ENST00000244302 QRICH2Q9H0J4 1663 aa17.8■□□□□ 0.44
HIF3A-201ENST00000244302 PER1O15534 1290 aaPredicted RBP17.8■□□□□ 0.44
HIF3A-201ENST00000244302 CCDC184Q52MB2 194 aa17.8■□□□□ 0.44
HIF3A-201ENST00000244302 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
HIF3A-201ENST00000244302 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms