RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 ANKRD45Q5TZF3 282 aa9.33□□□□□ -0.92
NEUROD4-201ENST00000242994 SMG6Q86US8 1419 aaKnown RBP9.33□□□□□ -0.92
NEUROD4-201ENST00000242994 CAMSAP2Q08AD1 1489 aa9.33□□□□□ -0.92
NEUROD4-201ENST00000242994 TSR2Q969E8 191 aaKnown RBP9.33□□□□□ -0.92
NEUROD4-201ENST00000242994 KIAA0586Q9BVV6 1533 aa9.33□□□□□ -0.92
NEUROD4-201ENST00000242994 GSE1Q14687 1217 aa9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 RPRD2Q5VT52 1461 aaKnown RBP9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 CHMP4BQ9H444 224 aaKnown RBP9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 ROCK1Q13464 1354 aa9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 LNPKQ9C0E8 428 aa9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 NFKBIBQ15653 356 aa9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 IFT140Q96RY7 1462 aa9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 SCAPERQ9BY12 1400 aa9.32□□□□□ -0.92
NEUROD4-201ENST00000242994 RUNDC1Q96C34 613 aa9.31□□□□□ -0.92
NEUROD4-201ENST00000242994 BACH2Q9BYV9 841 aa9.31□□□□□ -0.92
NEUROD4-201ENST00000242994 KCNJ4P48050 445 aa9.31□□□□□ -0.92
NEUROD4-201ENST00000242994 DZIP1LQ8IYY4 767 aaKnown RBP9.31□□□□□ -0.92
NEUROD4-201ENST00000242994 CUL7Q14999 1698 aa9.31□□□□□ -0.92
NEUROD4-201ENST00000242994 DNTTIP2Q5QJE6 756 aaKnown RBP9.31□□□□□ -0.92
NEUROD4-201ENST00000242994 NECTIN2Q92692 538 aa9.31□□□□□ -0.92
NEUROD4-201ENST00000242994 FOXD4L6Q3SYB3 417 aaPredicted RBP9.3□□□□□ -0.92
NEUROD4-201ENST00000242994 FOXD4L3Q6VB84 417 aaPredicted RBP9.3□□□□□ -0.92
NEUROD4-201ENST00000242994 ERBINQ96RT1 1412 aa9.3□□□□□ -0.92
NEUROD4-201ENST00000242994 DIAPH1O60610 1272 aaKnown RBP9.3□□□□□ -0.92
NEUROD4-201ENST00000242994 FRAT2O75474 233 aaPredicted RBP9.29□□□□□ -0.92
NEUROD4-201ENST00000242994 TRHP20396 242 aaPredicted RBP9.29□□□□□ -0.92
NEUROD4-201ENST00000242994 HAP1P54257 671 aaPredicted RBP9.29□□□□□ -0.92
NEUROD4-201ENST00000242994 NGDNQ8NEJ9 315 aaKnown RBP9.29□□□□□ -0.92
NEUROD4-201ENST00000242994 USP35Q9P2H5 1018 aa9.29□□□□□ -0.92
NEUROD4-201ENST00000242994 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
NEUROD4-201ENST00000242994 L1TD1Q5T7N2 865 aaKnown RBP9.29□□□□□ -0.92
NEUROD4-201ENST00000242994 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
NEUROD4-201ENST00000242994 NAP1L2Q9ULW6 460 aaPredicted RBP9.28□□□□□ -0.92
NEUROD4-201ENST00000242994 RAPGEF3O95398 923 aa9.28□□□□□ -0.92
NEUROD4-201ENST00000242994 CALD1Q05682 793 aaKnown RBP9.28□□□□□ -0.92
NEUROD4-201ENST00000242994 ARID3AQ99856 593 aa9.28□□□□□ -0.92
NEUROD4-201ENST00000242994 EXOSC9Q06265 439 aaKnown RBP9.28□□□□□ -0.92
NEUROD4-201ENST00000242994 MAGI1Q96QZ7 1491 aaPredicted RBP9.27□□□□□ -0.92
NEUROD4-201ENST00000242994 GOLGA6L3A6NEY3 463 aa9.27□□□□□ -0.92
NEUROD4-201ENST00000242994 AMPHP49418 695 aa9.27□□□□□ -0.92
NEUROD4-201ENST00000242994 HDGFP51858 240 aaKnown RBP9.27□□□□□ -0.93
NEUROD4-201ENST00000242994 GLIPR1L2Q4G1C9 344 aa9.27□□□□□ -0.93
NEUROD4-201ENST00000242994 GBP4Q96PP9 640 aa9.27□□□□□ -0.93
NEUROD4-201ENST00000242994 C1orf115Q9H7X2 142 aa9.27□□□□□ -0.93
NEUROD4-201ENST00000242994 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
NEUROD4-201ENST00000242994 FGD1P98174 961 aa9.27□□□□□ -0.93
NEUROD4-201ENST00000242994 STK31Q9BXU1 1019 aa9.27□□□□□ -0.93
NEUROD4-201ENST00000242994 COG3Q96JB2 828 aa9.26□□□□□ -0.93
NEUROD4-201ENST00000242994 BRPF3Q9ULD4 1205 aa9.26□□□□□ -0.93
NEUROD4-201ENST00000242994 GRIN2AQ12879 1464 aa9.26□□□□□ -0.93
NEUROD4-201ENST00000242994 DDX19BQ9UMR2 479 aa9.26□□□□□ -0.93
NEUROD4-201ENST00000242994 DISP3Q9P2K9 1392 aa9.26□□□□□ -0.93
NEUROD4-201ENST00000242994 PRAM1Q96QH2 718 aa9.25□□□□□ -0.93
NEUROD4-201ENST00000242994 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
NEUROD4-201ENST00000242994 UGGT2Q9NYU1 1516 aa9.25□□□□□ -0.93
NEUROD4-201ENST00000242994 GPATCH8Q9UKJ3 1502 aaKnown RBP9.24□□□□□ -0.93
NEUROD4-201ENST00000242994 PRKAR2BP31323 418 aa9.24□□□□□ -0.93
NEUROD4-201ENST00000242994 ZNF330Q9Y3S2 320 aaPredicted RBP9.24□□□□□ -0.93
NEUROD4-201ENST00000242994 PLEKHH2Q8IVE3 1493 aa9.24□□□□□ -0.93
NEUROD4-201ENST00000242994 NUTM2GQ5VZR2 741 aa9.24□□□□□ -0.93
NEUROD4-201ENST00000242994 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
NEUROD4-201ENST00000242994 RILPL2Q969X0 211 aa9.24□□□□□ -0.93
NEUROD4-201ENST00000242994 CCDC141Q6ZP82 1450 aa9.24□□□□□ -0.93
NEUROD4-201ENST00000242994 ADGRF5Q8IZF2 1346 aa9.23□□□□□ -0.93
NEUROD4-201ENST00000242994 C22orf23Q9BZE7 217 aa9.23□□□□□ -0.93
NEUROD4-201ENST00000242994 MCCP23508 829 aa9.23□□□□□ -0.93
NEUROD4-201ENST00000242994 WWC1Q8IX03 1113 aa9.23□□□□□ -0.93
NEUROD4-201ENST00000242994 NUP153P49790 1475 aaKnown RBP9.23□□□□□ -0.93
NEUROD4-201ENST00000242994 SLFN5Q08AF3 891 aa9.22□□□□□ -0.93
NEUROD4-201ENST00000242994 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
NEUROD4-201ENST00000242994 MSNP26038 577 aaKnown RBP9.22□□□□□ -0.93
NEUROD4-201ENST00000242994 FAM69CQ0P6D2 419 aa9.22□□□□□ -0.93
NEUROD4-201ENST00000242994 LMOD3Q0VAK6 560 aa9.22□□□□□ -0.93
NEUROD4-201ENST00000242994 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
NEUROD4-201ENST00000242994 EIF2S2P20042 333 aaKnown RBP9.21□□□□□ -0.93
NEUROD4-201ENST00000242994 DUSP27Q5VZP5 1158 aa9.21□□□□□ -0.93
NEUROD4-201ENST00000242994 DDX49Q9Y6V7 483 aaKnown RBP9.21□□□□□ -0.93
NEUROD4-201ENST00000242994 HMMRO75330 724 aa9.21□□□□□ -0.94
NEUROD4-201ENST00000242994 KIAA1211Q6ZU35 1233 aa9.21□□□□□ -0.94
NEUROD4-201ENST00000242994 NOB1Q9ULX3 412 aaKnown RBP9.21□□□□□ -0.94
NEUROD4-201ENST00000242994 CCDC9Q9Y3X0 531 aaKnown RBP9.21□□□□□ -0.94
NEUROD4-201ENST00000242994 ZNF428Q96B54 188 aa9.21□□□□□ -0.94
NEUROD4-201ENST00000242994 STAC3Q96MF2 364 aa9.21□□□□□ -0.94
NEUROD4-201ENST00000242994 NSD3Q9BZ95 1437 aa9.2□□□□□ -0.94
NEUROD4-201ENST00000242994 GOLGA6L4A6NEF3 574 aa9.2□□□□□ -0.94
NEUROD4-201ENST00000242994 PDE3AQ14432 1141 aa9.2□□□□□ -0.94
NEUROD4-201ENST00000242994 NGEFQ8N5V2 710 aa9.2□□□□□ -0.94
NEUROD4-201ENST00000242994 KIF16BQ96L93 1317 aa9.2□□□□□ -0.94
NEUROD4-201ENST00000242994 TXNDC2Q86VQ3 553 aa9.2□□□□□ -0.94
NEUROD4-201ENST00000242994 FBLN1P23142 703 aa9.19□□□□□ -0.94
NEUROD4-201ENST00000242994 CFAP43Q8NDM7 1665 aa9.19□□□□□ -0.94
NEUROD4-201ENST00000242994 CSB-PGBD3P0DP91 1061 aa9.19□□□□□ -0.94
NEUROD4-201ENST00000242994 FKBP5Q13451 457 aaPredicted RBP9.19□□□□□ -0.94
NEUROD4-201ENST00000242994 EID1Q9Y6B2 187 aa9.19□□□□□ -0.94
NEUROD4-201ENST00000242994 RRS1Q15050 365 aaKnown RBP9.18□□□□□ -0.94
NEUROD4-201ENST00000242994 CHMP3Q9Y3E7 222 aa9.18□□□□□ -0.94
NEUROD4-201ENST00000242994 ST18O60284 1047 aa9.18□□□□□ -0.94
NEUROD4-201ENST00000242994 ZRSR1Q15695 479 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms