RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 CCDC73Q6ZRK6 1079 aa16.83■□□□□ 0.28
TARDBP-201ENST00000240185 RUFY2Q8WXA3 655 aa16.83■□□□□ 0.28
TARDBP-201ENST00000240185 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
TARDBP-201ENST00000240185 CPLX1O14810 134 aa16.82■□□□□ 0.28
TARDBP-201ENST00000240185 SMC3Q9UQE7 1217 aa16.82■□□□□ 0.28
TARDBP-201ENST00000240185 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
TARDBP-201ENST00000240185 ELL2O00472 640 aaPredicted RBP16.81■□□□□ 0.28
TARDBP-201ENST00000240185 ANO2Q9NQ90 1003 aa16.81■□□□□ 0.28
TARDBP-201ENST00000240185 TMX4Q9H1E5 349 aaPredicted RBP16.81■□□□□ 0.28
TARDBP-201ENST00000240185 MYBBP1AQ9BQG0 1328 aaKnown RBP16.8■□□□□ 0.28
TARDBP-201ENST00000240185 TRAK2O60296 914 aa16.8■□□□□ 0.28
TARDBP-201ENST00000240185 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
TARDBP-201ENST00000240185 E9PSI1 815 aa16.79■□□□□ 0.28
TARDBP-201ENST00000240185 CAGE1Q8TC20 777 aa16.79■□□□□ 0.28
TARDBP-201ENST00000240185 MPHOSPH9Q99550 1183 aa16.79■□□□□ 0.28
TARDBP-201ENST00000240185 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.286e-7■□□□□ 11.3
TARDBP-201ENST00000240185 AXDND1Q5T1B0 1012 aaPredicted RBP16.78■□□□□ 0.28
TARDBP-201ENST00000240185 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
TARDBP-201ENST00000240185 RAB3GAP2Q9H2M9 1393 aa16.78■□□□□ 0.28
TARDBP-201ENST00000240185 PDILTQ8N807 584 aa16.78■□□□□ 0.28
TARDBP-201ENST00000240185 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
TARDBP-201ENST00000240185 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
TARDBP-201ENST00000240185 CCDC173Q0VFZ6 552 aa16.77■□□□□ 0.28
TARDBP-201ENST00000240185 TRIM5Q9C035 493 aa16.77■□□□□ 0.28
TARDBP-201ENST00000240185 SKIDA1Q1XH10 827 aa16.77■□□□□ 0.27
TARDBP-201ENST00000240185 NAT10Q9H0A0 1025 aaKnown RBP16.77■□□□□ 0.27
TARDBP-201ENST00000240185 TERF2IPQ9NYB0 399 aa16.77■□□□□ 0.27
TARDBP-201ENST00000240185 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
TARDBP-201ENST00000240185 KIF15Q9NS87 1388 aa16.76■□□□□ 0.27
TARDBP-201ENST00000240185 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
TARDBP-201ENST00000240185 DDX19BQ9UMR2 479 aa16.75■□□□□ 0.27
TARDBP-201ENST00000240185 CT47A1Q5JQC4 288 aaPredicted RBP16.75■□□□□ 0.27
TARDBP-201ENST00000240185 TTLL5Q6EMB2 1281 aa16.75■□□□□ 0.27
TARDBP-201ENST00000240185 CAVIN1Q6NZI2 390 aaKnown RBP16.75■□□□□ 0.27
TARDBP-201ENST00000240185 EIF3AQ14152 1382 aaKnown RBP16.75■□□□□ 0.27
TARDBP-201ENST00000240185 RNF20Q5VTR2 975 aa16.75■□□□□ 0.27
TARDBP-201ENST00000240185 RRP9O43818 475 aaKnown RBP16.74■□□□□ 0.27
TARDBP-201ENST00000240185 G3V3G9 751 aa16.74■□□□□ 0.27
TARDBP-201ENST00000240185 LRRFIP1Q32MZ4 808 aaKnown RBP16.74■□□□□ 0.27
TARDBP-201ENST00000240185 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
TARDBP-201ENST00000240185 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
TARDBP-201ENST00000240185 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
TARDBP-201ENST00000240185 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-201ENST00000240185 SDF4Q9BRK5 362 aa16.73■□□□□ 0.27
TARDBP-201ENST00000240185 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-201ENST00000240185 OFD1O75665 1012 aa16.73■□□□□ 0.27
TARDBP-201ENST00000240185 KIAA0754O94854 1291 aa16.73■□□□□ 0.27
TARDBP-201ENST00000240185 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
TARDBP-201ENST00000240185 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
TARDBP-201ENST00000240185 MBD3O95983 291 aa16.71■□□□□ 0.27
TARDBP-201ENST00000240185 FOSBP53539 338 aa16.71■□□□□ 0.27
TARDBP-201ENST00000240185 ODF2Q5BJF6 829 aa16.71■□□□□ 0.27
TARDBP-201ENST00000240185 TRDNQ13061 729 aa16.7■□□□□ 0.26
TARDBP-201ENST00000240185 TSPY26PQ9H489 355 aa16.7■□□□□ 0.26
TARDBP-201ENST00000240185 LETM1O95202 739 aaPredicted RBP16.7■□□□□ 0.26
TARDBP-201ENST00000240185 GGT6Q6P531 493 aa16.7■□□□□ 0.26
TARDBP-201ENST00000240185 DEF6Q9H4E7 631 aa16.7■□□□□ 0.26
TARDBP-201ENST00000240185 MYO6Q9UM54 1294 aa16.7■□□□□ 0.26
TARDBP-201ENST00000240185 CCP110O43303 1012 aa16.69■□□□□ 0.26
TARDBP-201ENST00000240185 USP8P40818 1118 aa16.69■□□□□ 0.26
TARDBP-201ENST00000240185 HSP90AB2PQ58FF8 381 aa16.69■□□□□ 0.26
TARDBP-201ENST00000240185 DZIP1LQ8IYY4 767 aaKnown RBP16.69■□□□□ 0.26
TARDBP-201ENST00000240185 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
TARDBP-201ENST00000240185 MLECQ14165 292 aa16.69■□□□□ 0.26
TARDBP-201ENST00000240185 TCEAL9Q9UHQ7 104 aa16.69■□□□□ 0.26
TARDBP-201ENST00000240185 IFIT2P09913 472 aaKnown RBP16.69■□□□□ 0.26
TARDBP-201ENST00000240185 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
TARDBP-201ENST00000240185 NUP155O75694 1391 aa16.69■□□□□ 0.26
TARDBP-201ENST00000240185 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
TARDBP-201ENST00000240185 SMC2O95347 1197 aa16.68■□□□□ 0.26
TARDBP-201ENST00000240185 CCDC112Q8NEF3 446 aa16.68■□□□□ 0.26
TARDBP-201ENST00000240185 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
TARDBP-201ENST00000240185 UQCRHLA0A096LP55 91 aa16.68■□□□□ 0.26
TARDBP-201ENST00000240185 GOLGA6L7A0A1B0GV03 622 aa16.68■□□□□ 0.26
TARDBP-201ENST00000240185 UQCRHP07919 91 aa16.68■□□□□ 0.26
TARDBP-201ENST00000240185 AMPHP49418 695 aa16.68■□□□□ 0.26
TARDBP-201ENST00000240185 SAFBQ15424 915 aaKnown RBP eCLIP16.68■□□□□ 0.26
TARDBP-201ENST00000240185 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
TARDBP-201ENST00000240185 KANK4Q5T7N3 995 aaPredicted RBP16.67■□□□□ 0.26
TARDBP-201ENST00000240185 APAF1O14727 1248 aa16.67■□□□□ 0.26
TARDBP-201ENST00000240185 NFXL1Q6ZNB6 911 aa16.67■□□□□ 0.26
TARDBP-201ENST00000240185 PANK3Q9H999 370 aa16.67■□□□□ 0.26
TARDBP-201ENST00000240185 SPC24Q8NBT2 197 aa16.66■□□□□ 0.26
TARDBP-201ENST00000240185 PRPF40AO75400 957 aaKnown RBP16.66■□□□□ 0.26
TARDBP-201ENST00000240185 ZFYVE27Q5T4F4 411 aa16.66■□□□□ 0.26
TARDBP-201ENST00000240185 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.66■□□□□ 0.26
TARDBP-201ENST00000240185 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
TARDBP-201ENST00000240185 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.263e-6■■■■■ 48.5
TARDBP-201ENST00000240185 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
TARDBP-201ENST00000240185 DHX16O60231 1041 aaKnown RBP16.65■□□□□ 0.26
TARDBP-201ENST00000240185 RAD21O60216 631 aa16.65■□□□□ 0.26
TARDBP-201ENST00000240185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.65■□□□□ 0.26
TARDBP-201ENST00000240185 C9orf78Q9NZ63 289 aaPredicted RBP16.65■□□□□ 0.26
TARDBP-201ENST00000240185 ERICH4A6NGS2 130 aa16.64■□□□□ 0.25
TARDBP-201ENST00000240185 API5Q9BZZ5 524 aaKnown RBP16.64■□□□□ 0.25
TARDBP-201ENST00000240185 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
TARDBP-201ENST00000240185 DHX37Q8IY37 1157 aaKnown RBP16.64■□□□□ 0.25
TARDBP-201ENST00000240185 GOLGA6L10A6NI86 522 aa16.63■□□□□ 0.25
TARDBP-201ENST00000240185 KINO60870 393 aaKnown RBP16.63■□□□□ 0.25
TARDBP-201ENST00000240185 EPS15P42566 896 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms