RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 TBC1D2Q9BYX2 928 aa11.71□□□□□ -0.53
NUDCD1-201ENST00000239690 MBD3O95983 291 aa11.71□□□□□ -0.54
NUDCD1-201ENST00000239690 FOXD4L6Q3SYB3 417 aaPredicted RBP11.71□□□□□ -0.54
NUDCD1-201ENST00000239690 FOXD4L3Q6VB84 417 aaPredicted RBP11.71□□□□□ -0.54
NUDCD1-201ENST00000239690 ATP6V1DQ9Y5K8 247 aa11.71□□□□□ -0.54
NUDCD1-201ENST00000239690 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.54
NUDCD1-201ENST00000239690 RUNDC1Q96C34 613 aa11.71□□□□□ -0.54
NUDCD1-201ENST00000239690 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
NUDCD1-201ENST00000239690 SRPK2P78362 688 aaKnown RBP11.7□□□□□ -0.54
NUDCD1-201ENST00000239690 KANK1Q14678 1352 aa11.7□□□□□ -0.54
NUDCD1-201ENST00000239690 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
NUDCD1-201ENST00000239690 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.543e-11■■■■■ 38.2
NUDCD1-201ENST00000239690 RSPH4AQ5TD94 716 aa11.69□□□□□ -0.54
NUDCD1-201ENST00000239690 ZNF644Q9H582 1327 aaPredicted RBP11.69□□□□□ -0.54
NUDCD1-201ENST00000239690 RRAGDQ9NQL2 400 aaPredicted RBP11.68□□□□□ -0.54
NUDCD1-201ENST00000239690 PLEKHH2Q8IVE3 1493 aa11.68□□□□□ -0.54
NUDCD1-201ENST00000239690 PRPF40AO75400 957 aaKnown RBP11.68□□□□□ -0.54
NUDCD1-201ENST00000239690 PANK2Q9BZ23 570 aa11.68□□□□□ -0.54
NUDCD1-201ENST00000239690 CCDC66A2RUB6 948 aa11.67□□□□□ -0.54
NUDCD1-201ENST00000239690 K7ELQ4 463 aaPredicted RBP11.67□□□□□ -0.54
NUDCD1-201ENST00000239690 SLFN5Q08AF3 891 aa11.67□□□□□ -0.54
NUDCD1-201ENST00000239690 FGD5Q6ZNL6 1462 aa11.67□□□□□ -0.54
NUDCD1-201ENST00000239690 CDC45O75419 566 aa11.67□□□□□ -0.54
NUDCD1-201ENST00000239690 KIAA1107Q9UPP5 1409 aa11.67□□□□□ -0.54
NUDCD1-201ENST00000239690 INTS3Q68E01 1043 aaKnown RBP11.67□□□□□ -0.54
NUDCD1-201ENST00000239690 C8orf34Q49A92 452 aa11.66□□□□□ -0.54
NUDCD1-201ENST00000239690 ZNF592Q92610 1267 aa11.66□□□□□ -0.54
NUDCD1-201ENST00000239690 RNF123Q5XPI4 1314 aa11.66□□□□□ -0.54
NUDCD1-201ENST00000239690 RABEP1Q15276 862 aa11.66□□□□□ -0.54
NUDCD1-201ENST00000239690 EFCAB5A4FU69 1503 aa11.66□□□□□ -0.54
NUDCD1-201ENST00000239690 ANKRD50Q9ULJ7 1429 aa11.65□□□□□ -0.54
NUDCD1-201ENST00000239690 ANKRD30BQ9BXX2 1392 aa11.65□□□□□ -0.54
NUDCD1-201ENST00000239690 TSPY26PQ9H489 355 aa11.65□□□□□ -0.54
NUDCD1-201ENST00000239690 TPM3P06753 285 aa11.65□□□□□ -0.54
NUDCD1-201ENST00000239690 SAFB2Q14151 953 aaKnown RBP eCLIP11.65□□□□□ -0.55
NUDCD1-201ENST00000239690 GOLGA6L19H0YKK7 550 aa11.64□□□□□ -0.55
NUDCD1-201ENST00000239690 SASS6Q6UVJ0 657 aa11.64□□□□□ -0.55
NUDCD1-201ENST00000239690 TCP11L2Q8N4U5 519 aa11.64□□□□□ -0.55
NUDCD1-201ENST00000239690 TBC1D32Q96NH3 1257 aa11.64□□□□□ -0.55
NUDCD1-201ENST00000239690 NAP1L2Q9ULW6 460 aaPredicted RBP11.64□□□□□ -0.55
NUDCD1-201ENST00000239690 HDGFL2Q7Z4V5 671 aaPredicted RBP11.64□□□□□ -0.55
NUDCD1-201ENST00000239690 EHBP1L1Q8N3D4 1523 aa11.63□□□□□ -0.55
NUDCD1-201ENST00000239690 TPM4P67936 248 aa11.63□□□□□ -0.55
NUDCD1-201ENST00000239690 CWC22Q9HCG8 908 aaKnown RBP11.63□□□□□ -0.55
NUDCD1-201ENST00000239690 PRDM10Q9NQV6 1147 aa11.63□□□□□ -0.55
NUDCD1-201ENST00000239690 IFT57Q9NWB7 429 aa11.63□□□□□ -0.55
NUDCD1-201ENST00000239690 TEX35Q5T0J7 233 aa11.63□□□□□ -0.55
NUDCD1-201ENST00000239690 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 CARMIL2Q6F5E8 1435 aa11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 TNPO1Q92973 898 aaKnown RBP11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 LMOD3Q0VAK6 560 aa11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 MVPQ14764 893 aaKnown RBP11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 NBPF1Q3BBV0 1214 aa11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 KIF3AQ9Y496 699 aa11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 LRPPRCP42704 1394 aaKnown RBP11.62□□□□□ -0.55
NUDCD1-201ENST00000239690 BECN2A8MW95 431 aa11.61□□□□□ -0.55
NUDCD1-201ENST00000239690 DYNC1I1O14576 645 aa11.61□□□□□ -0.55
NUDCD1-201ENST00000239690 TAF3Q5VWG9 929 aa11.61□□□□□ -0.55
NUDCD1-201ENST00000239690 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
NUDCD1-201ENST00000239690 API5Q9BZZ5 524 aaKnown RBP11.61□□□□□ -0.55
NUDCD1-201ENST00000239690 RPRD2Q5VT52 1461 aaKnown RBP11.61□□□□□ -0.55
NUDCD1-201ENST00000239690 PTPN23Q9H3S7 1636 aa11.6□□□□□ -0.55
NUDCD1-201ENST00000239690 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
NUDCD1-201ENST00000239690 GPS2Q13227 327 aa11.6□□□□□ -0.55
NUDCD1-201ENST00000239690 ZHX1Q9UKY1 873 aaPredicted RBP11.6□□□□□ -0.55
NUDCD1-201ENST00000239690 GOLGA6L1Q8N7Z2 621 aa11.6□□□□□ -0.55
NUDCD1-201ENST00000239690 TERF2IPQ9NYB0 399 aa11.6□□□□□ -0.55
NUDCD1-201ENST00000239690 PCF11O94913 1555 aaKnown RBP11.6□□□□□ -0.55
NUDCD1-201ENST00000239690 LETM1O95202 739 aaPredicted RBP11.59□□□□□ -0.55
NUDCD1-201ENST00000239690 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
NUDCD1-201ENST00000239690 MCM5P33992 734 aa11.59□□□□□ -0.55
NUDCD1-201ENST00000239690 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
NUDCD1-201ENST00000239690 PDCL2Q8N4E4 241 aa11.59□□□□□ -0.55
NUDCD1-201ENST00000239690 GCC1Q96CN9 775 aa11.59□□□□□ -0.55
NUDCD1-201ENST00000239690 RTF1Q92541 710 aaKnown RBP11.59□□□□□ -0.55
NUDCD1-201ENST00000239690 ANO2Q9NQ90 1003 aa11.59□□□□□ -0.55
NUDCD1-201ENST00000239690 NKTRP30414 1462 aaKnown RBP11.58□□□□□ -0.55
NUDCD1-201ENST00000239690 MCM2P49736 904 aa11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 RIPK4P57078 832 aa11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 TRAK1Q9UPV9 953 aa11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 IGHDP01880 384 aa11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 MPNDQ8N594 471 aa11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 SUPT6HQ7KZ85 1726 aaKnown RBP11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 CBX1P83916 185 aa11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 WDR63Q8IWG1 891 aa11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 STAC3Q96MF2 364 aa11.58□□□□□ -0.56
NUDCD1-201ENST00000239690 FAM184AQ8NB25 1140 aa11.57□□□□□ -0.56
NUDCD1-201ENST00000239690 CT47B1P0C2W7 299 aaPredicted RBP11.57□□□□□ -0.56
NUDCD1-201ENST00000239690 NEK4P51957 841 aa11.57□□□□□ -0.56
NUDCD1-201ENST00000239690 ROCK1Q13464 1354 aa11.57□□□□□ -0.56
NUDCD1-201ENST00000239690 EXOSC9Q06265 439 aaKnown RBP11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 ARGLU1Q9NWB6 273 aaPredicted RBP11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 STK26Q9P289 416 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 TAOK2Q9UL54 1235 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 OFD1O75665 1012 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 KLHL40Q2TBA0 621 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms