RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 DMRT2Q9Y5R5 561 aa12.06□□□□□ -0.48
SYDE2-201ENST00000234668 ABCC1P33527 1531 aa12.06□□□□□ -0.48
SYDE2-201ENST00000234668 KANK1Q14678 1352 aa12.06□□□□□ -0.48
SYDE2-201ENST00000234668 PDE4AP27815 886 aa12.06□□□□□ -0.48
SYDE2-201ENST00000234668 PLXNC1O60486 1568 aa12.05□□□□□ -0.48
SYDE2-201ENST00000234668 SLC12A5Q9H2X9 1139 aa12.05□□□□□ -0.48
SYDE2-201ENST00000234668 DUSP27Q5VZP5 1158 aa12.05□□□□□ -0.48
SYDE2-201ENST00000234668 RRP7AQ9Y3A4 280 aaKnown RBP12.05□□□□□ -0.48
SYDE2-201ENST00000234668 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
SYDE2-201ENST00000234668 CFAP65Q6ZU64 1925 aaKnown RBP12.04□□□□□ -0.48
SYDE2-201ENST00000234668 IPO9Q96P70 1041 aaKnown RBP12.04□□□□□ -0.48
SYDE2-201ENST00000234668 RAPGEF3O95398 923 aa12.04□□□□□ -0.48
SYDE2-201ENST00000234668 GOLGA2Q08379 1002 aa12.04□□□□□ -0.48
SYDE2-201ENST00000234668 CDCA8Q53HL2 280 aa12.04□□□□□ -0.48
SYDE2-201ENST00000234668 BCAR3O75815 825 aa12.03□□□□□ -0.48
SYDE2-201ENST00000234668 ADGRL1O94910 1474 aa12.03□□□□□ -0.48
SYDE2-201ENST00000234668 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYDE2-201ENST00000234668 SCAF11Q99590 1463 aaKnown RBP12.02□□□□□ -0.48
SYDE2-201ENST00000234668 LAS1LQ9Y4W2 734 aaKnown RBP12.02□□□□□ -0.49
SYDE2-201ENST00000234668 BLMP54132 1417 aaPredicted RBP12.01□□□□□ -0.49
SYDE2-201ENST00000234668 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
SYDE2-201ENST00000234668 ZFYVE16Q7Z3T8 1539 aa12.01□□□□□ -0.49
SYDE2-201ENST00000234668 RGS3P49796 1198 aa12□□□□□ -0.49
SYDE2-201ENST00000234668 STK26Q9P289 416 aa12□□□□□ -0.49
SYDE2-201ENST00000234668 ASXL2Q76L83 1435 aa12□□□□□ -0.49
SYDE2-201ENST00000234668 PTPRTO14522 1441 aa12□□□□□ -0.49
SYDE2-201ENST00000234668 TCERG1O14776 1098 aaKnown RBP12□□□□□ -0.49
SYDE2-201ENST00000234668 SLC4A3P48751 1232 aa12□□□□□ -0.49
SYDE2-201ENST00000234668 BCL11AQ9H165 835 aa12□□□□□ -0.49
SYDE2-201ENST00000234668 CLASP1Q7Z460 1538 aa12□□□□□ -0.49
SYDE2-201ENST00000234668 SLFN5Q08AF3 891 aa11.99□□□□□ -0.49
SYDE2-201ENST00000234668 BACH2Q9BYV9 841 aa11.99□□□□□ -0.49
SYDE2-201ENST00000234668 UHRF1BP1LA0JNW5 1464 aa11.99□□□□□ -0.49
SYDE2-201ENST00000234668 RTEL1-TNFRSF6BF6WH68 1400 aa11.99□□□□□ -0.49
SYDE2-201ENST00000234668 EIF2AK4Q9P2K8 1649 aaKnown RBP11.99□□□□□ -0.49
SYDE2-201ENST00000234668 NOS1P29475 1434 aa11.98□□□□□ -0.49
SYDE2-201ENST00000234668 MADDQ8WXG6 1647 aa11.98□□□□□ -0.49
SYDE2-201ENST00000234668 ATP7AQ04656 1500 aa11.98□□□□□ -0.49
SYDE2-201ENST00000234668 DEKP35659 375 aaKnown RBP11.98□□□□□ -0.49
SYDE2-201ENST00000234668 MORC1Q86VD1 984 aa11.98□□□□□ -0.49
SYDE2-201ENST00000234668 TRPM2O94759 1503 aa11.97□□□□□ -0.49
SYDE2-201ENST00000234668 BCL2L13Q9BXK5 485 aa11.97□□□□□ -0.49
SYDE2-201ENST00000234668 CENPJQ9HC77 1338 aaPredicted RBP11.97□□□□□ -0.49
SYDE2-201ENST00000234668 EIF3AQ14152 1382 aaKnown RBP11.96□□□□□ -0.49
SYDE2-201ENST00000234668 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.49
SYDE2-201ENST00000234668 ZNF521Q96K83 1311 aa11.96□□□□□ -0.49
SYDE2-201ENST00000234668 CABP2Q9NPB3 220 aa11.96□□□□□ -0.5
SYDE2-201ENST00000234668 ASXL1Q8IXJ9 1541 aa11.95□□□□□ -0.5
SYDE2-201ENST00000234668 ZMYM4Q5VZL5 1548 aa11.95□□□□□ -0.5
SYDE2-201ENST00000234668 ERVK-7P63135 1459 aa11.95□□□□□ -0.5
SYDE2-201ENST00000234668 PANK1Q8TE04 598 aa11.95□□□□□ -0.5
SYDE2-201ENST00000234668 TNNQ9UQP3 1299 aa11.94□□□□□ -0.5
SYDE2-201ENST00000234668 MTHFSP49914 203 aa11.94□□□□□ -0.5
SYDE2-201ENST00000234668 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
SYDE2-201ENST00000234668 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
SYDE2-201ENST00000234668 LAMC1P11047 1609 aa11.93□□□□□ -0.5
SYDE2-201ENST00000234668 SPHKAPQ2M3C7 1700 aa11.93□□□□□ -0.5
SYDE2-201ENST00000234668 RNF17Q9BXT8 1623 aaKnown RBP11.93□□□□□ -0.5
SYDE2-201ENST00000234668 CANXP27824 592 aaKnown RBP11.93□□□□□ -0.5
SYDE2-201ENST00000234668 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
SYDE2-201ENST00000234668 NSD3Q9BZ95 1437 aa11.92□□□□□ -0.5
SYDE2-201ENST00000234668 WWC1Q8IX03 1113 aa11.92□□□□□ -0.5
SYDE2-201ENST00000234668 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
SYDE2-201ENST00000234668 C14orf93Q9H972 538 aaKnown RBP11.92□□□□□ -0.5
SYDE2-201ENST00000234668 CD109Q6YHK3 1445 aa11.92□□□□□ -0.5
SYDE2-201ENST00000234668 IQGAP1P46940 1657 aa11.91□□□□□ -0.5
SYDE2-201ENST00000234668 IGHDP01880 384 aa11.91□□□□□ -0.5
SYDE2-201ENST00000234668 TCP11L2Q8N4U5 519 aa11.91□□□□□ -0.5
SYDE2-201ENST00000234668 IDI1Q13907 227 aa11.91□□□□□ -0.5
SYDE2-201ENST00000234668 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.91□□□□□ -0.5
SYDE2-201ENST00000234668 NPATQ14207 1427 aa11.9□□□□□ -0.5
SYDE2-201ENST00000234668 KDM2BQ8NHM5 1336 aa11.9□□□□□ -0.5
SYDE2-201ENST00000234668 FBLN1P23142 703 aa11.9□□□□□ -0.5
SYDE2-201ENST00000234668 E9PSI1 815 aa11.89□□□□□ -0.51
SYDE2-201ENST00000234668 MS4A1P11836 297 aa11.89□□□□□ -0.51
SYDE2-201ENST00000234668 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
SYDE2-201ENST00000234668 TRMT2AQ8IZ69 625 aaKnown RBP11.89□□□□□ -0.51
SYDE2-201ENST00000234668 GGNBP2Q9H3C7 697 aa11.89□□□□□ -0.51
SYDE2-201ENST00000234668 TET3O43151 1660 aa11.89□□□□□ -0.51
SYDE2-201ENST00000234668 PIK3C2GO75747 1445 aa11.89□□□□□ -0.51
SYDE2-201ENST00000234668 U2AF1L5P0DN76 240 aaPredicted RBP11.89□□□□□ -0.51
SYDE2-201ENST00000234668 U2AF1Q01081 240 aaKnown RBP eCLIP11.89□□□□□ -0.517e-8■■■■■ 29.4
SYDE2-201ENST00000234668 CEP152O94986 1710 aa11.89□□□□□ -0.51
SYDE2-201ENST00000234668 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
SYDE2-201ENST00000234668 FBXO31Q5XUX0 539 aaPredicted RBP11.89□□□□□ -0.51
SYDE2-201ENST00000234668 MINK1Q8N4C8 1332 aaPredicted RBP11.88□□□□□ -0.51
SYDE2-201ENST00000234668 U2SURPO15042 1029 aaKnown RBP11.88□□□□□ -0.51
SYDE2-201ENST00000234668 CENPQQ7L2Z9 268 aaPredicted RBP11.88□□□□□ -0.51
SYDE2-201ENST00000234668 ABCA6Q8N139 1617 aa11.88□□□□□ -0.51
SYDE2-201ENST00000234668 MROH1Q8NDA8 1641 aa11.88□□□□□ -0.51
SYDE2-201ENST00000234668 NEFMP07197 916 aa11.88□□□□□ -0.51
SYDE2-201ENST00000234668 INO80Q9ULG1 1556 aaPredicted RBP11.87□□□□□ -0.51
SYDE2-201ENST00000234668 CYB5RLQ6IPT4 315 aa11.87□□□□□ -0.51
SYDE2-201ENST00000234668 SYNMO15061 1565 aa11.87□□□□□ -0.51
SYDE2-201ENST00000234668 ABCA9Q8IUA7 1624 aa11.87□□□□□ -0.51
SYDE2-201ENST00000234668 MAP3K4Q9Y6R4 1608 aa11.86□□□□□ -0.51
SYDE2-201ENST00000234668 KIDINS220Q9ULH0 1771 aa11.86□□□□□ -0.51
SYDE2-201ENST00000234668 PPRC1Q5VV67 1664 aaKnown RBP11.86□□□□□ -0.51
SYDE2-201ENST00000234668 VWDEQ8N2E2 1590 aa11.86□□□□□ -0.51
SYDE2-201ENST00000234668 RLBP1P12271 317 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms