RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 GPRASP1Q5JY77 1395 aa18.16■□□□□ 0.5
USP5-201ENST00000229268 DIP2CQ9Y2E4 1556 aa18.16■□□□□ 0.5
USP5-201ENST00000229268 SUPT16HQ9Y5B9 1047 aaKnown RBP18.16■□□□□ 0.5
USP5-201ENST00000229268 VWDEQ8N2E2 1590 aa18.16■□□□□ 0.5
USP5-201ENST00000229268 MAP3K4Q9Y6R4 1608 aa18.15■□□□□ 0.5
USP5-201ENST00000229268 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.49
USP5-201ENST00000229268 ABCC3O15438 1527 aa18.14■□□□□ 0.49
USP5-201ENST00000229268 RNF17Q9BXT8 1623 aaKnown RBP18.12■□□□□ 0.49
USP5-201ENST00000229268 EIF2AK4Q9P2K8 1649 aaKnown RBP18.12■□□□□ 0.49
USP5-201ENST00000229268 NEFLP07196 543 aa18.12■□□□□ 0.49
USP5-201ENST00000229268 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
USP5-201ENST00000229268 VGFO15240 615 aaPredicted RBP18.12■□□□□ 0.49
USP5-201ENST00000229268 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
USP5-201ENST00000229268 KTN1Q86UP2 1357 aaKnown RBP18.1■□□□□ 0.49
USP5-201ENST00000229268 CEBPAP49715 358 aaPredicted RBP18.1■□□□□ 0.49
USP5-201ENST00000229268 RICTORQ6R327 1708 aa18.1■□□□□ 0.49
USP5-201ENST00000229268 SCAF11Q99590 1463 aaKnown RBP18.09■□□□□ 0.49
USP5-201ENST00000229268 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
USP5-201ENST00000229268 CENPJQ9HC77 1338 aaPredicted RBP18.08■□□□□ 0.48
USP5-201ENST00000229268 C14orf93Q9H972 538 aaKnown RBP18.08■□□□□ 0.48
USP5-201ENST00000229268 SLC52A1Q9NWF4 448 aa18.08■□□□□ 0.48
USP5-201ENST00000229268 MADDQ8WXG6 1647 aa18.08■□□□□ 0.48
USP5-201ENST00000229268 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
USP5-201ENST00000229268 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
USP5-201ENST00000229268 RALBP1Q15311 655 aa18.07■□□□□ 0.48
USP5-201ENST00000229268 CDCA8Q53HL2 280 aa18.07■□□□□ 0.48
USP5-201ENST00000229268 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
USP5-201ENST00000229268 GLI2P10070 1586 aa18.06■□□□□ 0.48
USP5-201ENST00000229268 SLC12A5Q9H2X9 1139 aa18.06■□□□□ 0.48
USP5-201ENST00000229268 CABP2Q9NPB3 220 aa18.05■□□□□ 0.48
USP5-201ENST00000229268 POGKQ9P215 609 aa18.04■□□□□ 0.48
USP5-201ENST00000229268 KIF1BO60333 1816 aa18.04■□□□□ 0.48
USP5-201ENST00000229268 MINK1Q8N4C8 1332 aaPredicted RBP18.04■□□□□ 0.48
USP5-201ENST00000229268 MROH2AA6NES4 1674 aa18.04■□□□□ 0.48
USP5-201ENST00000229268 LMTK2Q8IWU2 1503 aa18.04■□□□□ 0.48
USP5-201ENST00000229268 NLRP13Q86W25 1043 aa18.03■□□□□ 0.48
USP5-201ENST00000229268 SRPK2P78362 688 aaKnown RBP18.02■□□□□ 0.48
USP5-201ENST00000229268 CAMSAP1Q5T5Y3 1602 aa18■□□□□ 0.47
USP5-201ENST00000229268 RPGRIP1LQ68CZ1 1315 aa18■□□□□ 0.47
USP5-201ENST00000229268 SIGLEC1Q9BZZ2 1709 aa18■□□□□ 0.47
USP5-201ENST00000229268 PRAM1Q96QH2 718 aa17.99■□□□□ 0.47
USP5-201ENST00000229268 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
USP5-201ENST00000229268 CARD14Q9BXL6 1004 aa17.98■□□□□ 0.47
USP5-201ENST00000229268 SYNMO15061 1565 aa17.98■□□□□ 0.47
USP5-201ENST00000229268 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
USP5-201ENST00000229268 ADGRB3O60242 1522 aa17.97■□□□□ 0.47
USP5-201ENST00000229268 ZMYM3Q14202 1370 aa17.97■□□□□ 0.47
USP5-201ENST00000229268 AMER1Q5JTC6 1135 aaPredicted RBP17.96■□□□□ 0.47
USP5-201ENST00000229268 PIK3C2GO75747 1445 aa17.96■□□□□ 0.47
USP5-201ENST00000229268 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.47
USP5-201ENST00000229268 MYOM2P54296 1465 aa17.95■□□□□ 0.46
USP5-201ENST00000229268 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
USP5-201ENST00000229268 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
USP5-201ENST00000229268 PARD3Q8TEW0 1356 aa17.93■□□□□ 0.46
USP5-201ENST00000229268 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
USP5-201ENST00000229268 CCDC146Q8IYE0 955 aa17.93■□□□□ 0.46
USP5-201ENST00000229268 ADAMTS8Q9UP79 889 aa17.93■□□□□ 0.46
USP5-201ENST00000229268 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
USP5-201ENST00000229268 KIF13AQ9H1H9 1805 aa17.92■□□□□ 0.46
USP5-201ENST00000229268 WDR43Q15061 677 aaKnown RBP eCLIP17.92■□□□□ 0.46
USP5-201ENST00000229268 ARHGAP31Q2M1Z3 1444 aa17.92■□□□□ 0.46
USP5-201ENST00000229268 TXNDC2Q86VQ3 553 aa17.91■□□□□ 0.46
USP5-201ENST00000229268 ERVK-7P63135 1459 aa17.91■□□□□ 0.46
USP5-201ENST00000229268 EVC2Q86UK5 1308 aa17.9■□□□□ 0.46
USP5-201ENST00000229268 ZMYM4Q5VZL5 1548 aa17.9■□□□□ 0.46
USP5-201ENST00000229268 MORC1Q86VD1 984 aa17.9■□□□□ 0.46
USP5-201ENST00000229268 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.45
USP5-201ENST00000229268 SLC26A8Q96RN1 970 aa17.89■□□□□ 0.45
USP5-201ENST00000229268 CLTCQ00610 1675 aaKnown RBP17.89■□□□□ 0.45
USP5-201ENST00000229268 IQGAP1P46940 1657 aa17.88■□□□□ 0.45
USP5-201ENST00000229268 LAMC1P11047 1609 aa17.87■□□□□ 0.45
USP5-201ENST00000229268 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
USP5-201ENST00000229268 PIK3C2BO00750 1634 aa17.86■□□□□ 0.45
USP5-201ENST00000229268 NEUROD2Q15784 382 aa17.86■□□□□ 0.45
USP5-201ENST00000229268 NRXN1Q9ULB1 1477 aa17.86■□□□□ 0.45
USP5-201ENST00000229268 NEXMIFQ5QGS0 1516 aa17.85■□□□□ 0.45
USP5-201ENST00000229268 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
USP5-201ENST00000229268 MYO5BQ9ULV0 1848 aa17.85■□□□□ 0.45
USP5-201ENST00000229268 GGNBP2Q9H3C7 697 aa17.85■□□□□ 0.45
USP5-201ENST00000229268 NSD3Q9BZ95 1437 aa17.85■□□□□ 0.45
USP5-201ENST00000229268 RIMS2Q9UQ26 1411 aa17.85■□□□□ 0.45
USP5-201ENST00000229268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.85■□□□□ 0.45
USP5-201ENST00000229268 CDK19Q9BWU1 502 aa17.85■□□□□ 0.45
USP5-201ENST00000229268 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
USP5-201ENST00000229268 PPLO60437 1756 aa17.84■□□□□ 0.45
USP5-201ENST00000229268 CABP1Q9NZU7 370 aa17.83■□□□□ 0.45
USP5-201ENST00000229268 NCKAP5LQ9HCH0 1330 aa17.83■□□□□ 0.45
USP5-201ENST00000229268 FBLN1P23142 703 aa17.83■□□□□ 0.44
USP5-201ENST00000229268 TNRQ92752 1358 aa17.83■□□□□ 0.44
USP5-201ENST00000229268 PPM1GO15355 546 aaPredicted RBP17.82■□□□□ 0.44
USP5-201ENST00000229268 PLEKHH1Q9ULM0 1364 aa17.82■□□□□ 0.44
USP5-201ENST00000229268 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
USP5-201ENST00000229268 ADGRB1O14514 1584 aa17.81■□□□□ 0.44
USP5-201ENST00000229268 LTKP29376 864 aa17.81■□□□□ 0.44
USP5-201ENST00000229268 YTHDC2Q9H6S0 1430 aaKnown RBP17.8■□□□□ 0.44
USP5-201ENST00000229268 IFT172Q9UG01 1749 aa17.8■□□□□ 0.44
USP5-201ENST00000229268 A2ML1A8K2U0 1454 aa17.8■□□□□ 0.44
USP5-201ENST00000229268 ARHGEF40Q8TER5 1519 aa17.79■□□□□ 0.44
USP5-201ENST00000229268 B4GALNT3Q6L9W6 998 aa17.79■□□□□ 0.44
USP5-201ENST00000229268 LRPPRCP42704 1394 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms