RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 PLCH2O75038 1416 aa12.51□□□□□ -0.41
CRX-201ENST00000221996 ADGRL2O95490 1459 aa12.51□□□□□ -0.41
CRX-201ENST00000221996 COG6Q9Y2V7 657 aa12.51□□□□□ -0.41
CRX-201ENST00000221996 DISP3Q9P2K9 1392 aa12.5□□□□□ -0.41
CRX-201ENST00000221996 SHANK2Q9UPX8 1470 aa12.5□□□□□ -0.41
CRX-201ENST00000221996 FAM135AQ9P2D6 1515 aa12.5□□□□□ -0.41
CRX-201ENST00000221996 ITPRIPQ8IWB1 547 aa12.5□□□□□ -0.41
CRX-201ENST00000221996 ADGRL1O94910 1474 aa12.5□□□□□ -0.41
CRX-201ENST00000221996 MTHFSP49914 203 aa12.5□□□□□ -0.41
CRX-201ENST00000221996 NUTM2FA1L443 756 aa12.49□□□□□ -0.41
CRX-201ENST00000221996 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
CRX-201ENST00000221996 RWDD1Q9H446 243 aaPredicted RBP12.49□□□□□ -0.41
CRX-201ENST00000221996 RUNDC1Q96C34 613 aa12.49□□□□□ -0.41
CRX-201ENST00000221996 ADGRF5Q8IZF2 1346 aa12.48□□□□□ -0.41
CRX-201ENST00000221996 IPO8O15397 1037 aaKnown RBP12.48□□□□□ -0.41
CRX-201ENST00000221996 NGEFQ8N5V2 710 aa12.48□□□□□ -0.41
CRX-201ENST00000221996 PRAG1Q86YV5 1406 aa12.48□□□□□ -0.41
CRX-201ENST00000221996 TRAPPC8Q9Y2L5 1435 aa12.48□□□□□ -0.41
CRX-201ENST00000221996 FANCAO15360 1455 aa12.47□□□□□ -0.41
CRX-201ENST00000221996 DEKP35659 375 aaKnown RBP12.47□□□□□ -0.41
CRX-201ENST00000221996 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
CRX-201ENST00000221996 DHX29Q7Z478 1369 aaKnown RBP12.46□□□□□ -0.41
CRX-201ENST00000221996 TCP11L2Q8N4U5 519 aa12.46□□□□□ -0.41
CRX-201ENST00000221996 CHMP4BQ9H444 224 aaKnown RBP12.46□□□□□ -0.41
CRX-201ENST00000221996 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
CRX-201ENST00000221996 DUOX2Q9NRD8 1548 aa12.45□□□□□ -0.42
CRX-201ENST00000221996 TESK2Q96S53 571 aa12.45□□□□□ -0.42
CRX-201ENST00000221996 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
CRX-201ENST00000221996 FAM161AQ3B820 660 aa12.43□□□□□ -0.42
CRX-201ENST00000221996 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
CRX-201ENST00000221996 ARHGEF12Q9NZN5 1544 aa12.43□□□□□ -0.42
CRX-201ENST00000221996 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
CRX-201ENST00000221996 PANK1Q8TE04 598 aa12.43□□□□□ -0.42
CRX-201ENST00000221996 PRAM1Q96QH2 718 aa12.43□□□□□ -0.42
CRX-201ENST00000221996 SPATA31E1Q6ZUB1 1445 aa12.43□□□□□ -0.42
CRX-201ENST00000221996 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
CRX-201ENST00000221996 UHRF1BP1Q6BDS2 1440 aa12.43□□□□□ -0.42
CRX-201ENST00000221996 ABCC10Q5T3U5 1492 aa12.42□□□□□ -0.42
CRX-201ENST00000221996 BCAR3O75815 825 aa12.42□□□□□ -0.42
CRX-201ENST00000221996 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
CRX-201ENST00000221996 SLC52A1Q9NWF4 448 aa12.42□□□□□ -0.42
CRX-201ENST00000221996 SCAF11Q99590 1463 aaKnown RBP12.42□□□□□ -0.42
CRX-201ENST00000221996 SLC4A3P48751 1232 aa12.42□□□□□ -0.42
CRX-201ENST00000221996 RIPK4P57078 832 aa12.41□□□□□ -0.42
CRX-201ENST00000221996 RPGRIP1LQ68CZ1 1315 aa12.41□□□□□ -0.42
CRX-201ENST00000221996 ABCC2Q92887 1545 aa12.41□□□□□ -0.42
CRX-201ENST00000221996 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
CRX-201ENST00000221996 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
CRX-201ENST00000221996 COG3Q96JB2 828 aa12.4□□□□□ -0.42
CRX-201ENST00000221996 EID1Q9Y6B2 187 aa12.4□□□□□ -0.42
CRX-201ENST00000221996 ABCA8O94911 1581 aa12.39□□□□□ -0.43
CRX-201ENST00000221996 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
CRX-201ENST00000221996 MBD5Q9P267 1494 aa12.39□□□□□ -0.43
CRX-201ENST00000221996 NSD3Q9BZ95 1437 aa12.39□□□□□ -0.43
CRX-201ENST00000221996 PARD3Q8TEW0 1356 aa12.39□□□□□ -0.43
CRX-201ENST00000221996 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
CRX-201ENST00000221996 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
CRX-201ENST00000221996 SLKQ9H2G2 1235 aaPredicted RBP12.39□□□□□ -0.43
CRX-201ENST00000221996 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
CRX-201ENST00000221996 NOS1P29475 1434 aa12.38□□□□□ -0.43
CRX-201ENST00000221996 ASXL2Q76L83 1435 aa12.38□□□□□ -0.43
CRX-201ENST00000221996 APBB1O00213 710 aa12.38□□□□□ -0.43
CRX-201ENST00000221996 SLFN5Q08AF3 891 aa12.38□□□□□ -0.43
CRX-201ENST00000221996 C20orf194Q5TEA3 1177 aa12.38□□□□□ -0.43
CRX-201ENST00000221996 NGDNQ8NEJ9 315 aaKnown RBP12.38□□□□□ -0.43
CRX-201ENST00000221996 A2MP01023 1474 aa12.38□□□□□ -0.43
CRX-201ENST00000221996 HMOX1P09601 288 aa12.37□□□□□ -0.43
CRX-201ENST00000221996 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
CRX-201ENST00000221996 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
CRX-201ENST00000221996 ADGBQ8N7X0 1667 aa12.37□□□□□ -0.43
CRX-201ENST00000221996 WDR7Q9Y4E6 1490 aa12.37□□□□□ -0.43
CRX-201ENST00000221996 IDI1Q13907 227 aa12.37□□□□□ -0.43
CRX-201ENST00000221996 DENND4BO75064 1496 aaPredicted RBP12.37□□□□□ -0.43
CRX-201ENST00000221996 MFAP1P55081 439 aaKnown RBP12.37□□□□□ -0.43
CRX-201ENST00000221996 LMOD3Q0VAK6 560 aa12.36□□□□□ -0.43
CRX-201ENST00000221996 CABP1Q9NZU7 370 aa12.36□□□□□ -0.43
CRX-201ENST00000221996 MSH5O43196 834 aa12.35□□□□□ -0.43
CRX-201ENST00000221996 CASC1Q6TDU7 716 aa12.35□□□□□ -0.43
CRX-201ENST00000221996 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
CRX-201ENST00000221996 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
CRX-201ENST00000221996 HSCBQ8IWL3 235 aa12.35□□□□□ -0.43
CRX-201ENST00000221996 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.35□□□□□ -0.43
CRX-201ENST00000221996 HSP90AB1P08238 724 aaKnown RBP12.35□□□□□ -0.43
CRX-201ENST00000221996 WWC1Q8IX03 1113 aa12.35□□□□□ -0.43
CRX-201ENST00000221996 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
CRX-201ENST00000221996 LRRIQ1Q96JM4 1722 aa12.34□□□□□ -0.43
CRX-201ENST00000221996 DUSP27Q5VZP5 1158 aa12.34□□□□□ -0.43
CRX-201ENST00000221996 TSR2Q969E8 191 aaKnown RBP12.34□□□□□ -0.43
CRX-201ENST00000221996 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
CRX-201ENST00000221996 AMPHP49418 695 aa12.34□□□□□ -0.43
CRX-201ENST00000221996 ANP32BQ92688 251 aaKnown RBP12.33□□□□□ -0.43
CRX-201ENST00000221996 PDE3AQ14432 1141 aa12.33□□□□□ -0.44
CRX-201ENST00000221996 EXOSC9Q06265 439 aaKnown RBP12.33□□□□□ -0.44
CRX-201ENST00000221996 ARHGEF5Q12774 1597 aa12.33□□□□□ -0.44
CRX-201ENST00000221996 FBXO31Q5XUX0 539 aaPredicted RBP12.33□□□□□ -0.44
CRX-201ENST00000221996 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
CRX-201ENST00000221996 DDX19BQ9UMR2 479 aa12.33□□□□□ -0.44
CRX-201ENST00000221996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.32□□□□□ -0.44
CRX-201ENST00000221996 RTEL1-TNFRSF6BF6WH68 1400 aa12.32□□□□□ -0.44
CRX-201ENST00000221996 LTV1Q96GA3 475 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms