RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ESCO1Q5FWF5 840 aa12.2□□□□□ -0.46
CCDC113-201ENST00000219299 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
CCDC113-201ENST00000219299 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
CCDC113-201ENST00000219299 WASHC2AQ641Q2 1341 aa12.19□□□□□ -0.46
CCDC113-201ENST00000219299 UHRF1BP1LA0JNW5 1464 aa12.19□□□□□ -0.46
CCDC113-201ENST00000219299 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
CCDC113-201ENST00000219299 TCOF1Q13428 1488 aaKnown RBP12.19□□□□□ -0.46
CCDC113-201ENST00000219299 WAPLQ7Z5K2 1190 aa12.19□□□□□ -0.46
CCDC113-201ENST00000219299 CCDC146Q8IYE0 955 aa12.19□□□□□ -0.46
CCDC113-201ENST00000219299 HSP90AA1P07900 732 aaKnown RBP12.18□□□□□ -0.46
CCDC113-201ENST00000219299 FRAT1Q92837 279 aaPredicted RBP12.18□□□□□ -0.46
CCDC113-201ENST00000219299 DUOX2Q9NRD8 1548 aa12.18□□□□□ -0.46
CCDC113-201ENST00000219299 CDK19Q9BWU1 502 aa12.17□□□□□ -0.46
CCDC113-201ENST00000219299 NLRP6P59044 892 aa12.17□□□□□ -0.46
CCDC113-201ENST00000219299 TNRQ92752 1358 aa12.17□□□□□ -0.46
CCDC113-201ENST00000219299 CABP1Q9NZU7 370 aa12.17□□□□□ -0.46
CCDC113-201ENST00000219299 MYBBP1AQ9BQG0 1328 aaKnown RBP12.16□□□□□ -0.46
CCDC113-201ENST00000219299 RTEL1-TNFRSF6BF6WH68 1400 aa12.15□□□□□ -0.46
CCDC113-201ENST00000219299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC113-201ENST00000219299 AMOTL2Q9Y2J4 779 aa12.14□□□□□ -0.47
CCDC113-201ENST00000219299 FTSJ3Q8IY81 847 aaKnown RBP12.14□□□□□ -0.47
CCDC113-201ENST00000219299 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
CCDC113-201ENST00000219299 NOS1P29475 1434 aa12.13□□□□□ -0.47
CCDC113-201ENST00000219299 ABTB2Q8N961 1025 aa12.13□□□□□ -0.47
CCDC113-201ENST00000219299 ZMYM3Q14202 1370 aa12.13□□□□□ -0.47
CCDC113-201ENST00000219299 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
CCDC113-201ENST00000219299 EVA1CP58658 441 aa12.13□□□□□ -0.47
CCDC113-201ENST00000219299 HSPA2P54652 639 aa12.12□□□□□ -0.47
CCDC113-201ENST00000219299 NEO1Q92859 1461 aa12.12□□□□□ -0.47
CCDC113-201ENST00000219299 RPRD2Q5VT52 1461 aaKnown RBP12.12□□□□□ -0.47
CCDC113-201ENST00000219299 MYH16Q9H6N6 1097 aa12.11□□□□□ -0.47
CCDC113-201ENST00000219299 SHANK2Q9UPX8 1470 aa12.11□□□□□ -0.47
CCDC113-201ENST00000219299 ATP10AO60312 1499 aa12.11□□□□□ -0.47
CCDC113-201ENST00000219299 GPRASP1Q5JY77 1395 aa12.11□□□□□ -0.47
CCDC113-201ENST00000219299 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
CCDC113-201ENST00000219299 XPCQ01831 940 aaPredicted RBP12.1□□□□□ -0.47
CCDC113-201ENST00000219299 YEATS2Q9ULM3 1422 aa12.1□□□□□ -0.47
CCDC113-201ENST00000219299 C14orf93Q9H972 538 aaKnown RBP12.1□□□□□ -0.47
CCDC113-201ENST00000219299 DIAPH1O60610 1272 aaKnown RBP12.09□□□□□ -0.47
CCDC113-201ENST00000219299 ATP7AQ04656 1500 aa12.09□□□□□ -0.47
CCDC113-201ENST00000219299 FAM135AQ9P2D6 1515 aa12.09□□□□□ -0.47
CCDC113-201ENST00000219299 NUDT16Q96DE0 195 aaKnown RBP12.09□□□□□ -0.47
CCDC113-201ENST00000219299 MTHFSP49914 203 aa12.08□□□□□ -0.48
CCDC113-201ENST00000219299 MBD5Q9P267 1494 aa12.08□□□□□ -0.48
CCDC113-201ENST00000219299 ERICH6BQ5W0A0 696 aa12.07□□□□□ -0.48
CCDC113-201ENST00000219299 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
CCDC113-201ENST00000219299 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
CCDC113-201ENST00000219299 CALD1Q05682 793 aaKnown RBP12.07□□□□□ -0.48
CCDC113-201ENST00000219299 APAF1O14727 1248 aa12.07□□□□□ -0.48
CCDC113-201ENST00000219299 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
CCDC113-201ENST00000219299 DNMT1P26358 1616 aaKnown RBP12.07□□□□□ -0.48
CCDC113-201ENST00000219299 ZCCHC11Q5TAX3 1644 aaKnown RBP12.06□□□□□ -0.48
CCDC113-201ENST00000219299 C11orf95C9JLR9 678 aaPredicted RBP12.06□□□□□ -0.48
CCDC113-201ENST00000219299 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
CCDC113-201ENST00000219299 NPHP1O15259 732 aa12.05□□□□□ -0.48
CCDC113-201ENST00000219299 HMOX1P09601 288 aa12.05□□□□□ -0.48
CCDC113-201ENST00000219299 FOXO3O43524 673 aa12.05□□□□□ -0.48
CCDC113-201ENST00000219299 NLRP2Q9NX02 1062 aa12.05□□□□□ -0.48
CCDC113-201ENST00000219299 CNTLNQ9NXG0 1405 aa12.05□□□□□ -0.48
CCDC113-201ENST00000219299 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
CCDC113-201ENST00000219299 CLASP1Q7Z460 1538 aa12.04□□□□□ -0.48
CCDC113-201ENST00000219299 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
CCDC113-201ENST00000219299 BECN1Q14457 450 aa12.04□□□□□ -0.48
CCDC113-201ENST00000219299 TTC37Q6PGP7 1564 aa12.04□□□□□ -0.48
CCDC113-201ENST00000219299 MAPKBP1O60336 1514 aa12.04□□□□□ -0.48
CCDC113-201ENST00000219299 ATAD2Q6PL18 1390 aa12.04□□□□□ -0.48
CCDC113-201ENST00000219299 TRIM44Q96DX7 344 aaPredicted RBP12.03□□□□□ -0.48
CCDC113-201ENST00000219299 ELL2O00472 640 aaPredicted RBP12.03□□□□□ -0.48
CCDC113-201ENST00000219299 ADGRL2O95490 1459 aa12.03□□□□□ -0.48
CCDC113-201ENST00000219299 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
CCDC113-201ENST00000219299 MEX3CQ5U5Q3 659 aaKnown RBP12.03□□□□□ -0.48
CCDC113-201ENST00000219299 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.48
CCDC113-201ENST00000219299 WASLO00401 505 aaPredicted RBP12.02□□□□□ -0.48
CCDC113-201ENST00000219299 RIMS2Q9UQ26 1411 aa12.02□□□□□ -0.49
CCDC113-201ENST00000219299 C1orf141Q5JVX7 400 aa12.02□□□□□ -0.49
CCDC113-201ENST00000219299 NOP58Q9Y2X3 529 aaKnown RBP12.02□□□□□ -0.49
CCDC113-201ENST00000219299 MYO5CQ9NQX4 1742 aa12.01□□□□□ -0.49
CCDC113-201ENST00000219299 CFAP65Q6ZU64 1925 aaKnown RBP12.01□□□□□ -0.49
CCDC113-201ENST00000219299 RCAN3Q9UKA8 241 aa12.01□□□□□ -0.49
CCDC113-201ENST00000219299 PZPP20742 1482 aa12.01□□□□□ -0.49
CCDC113-201ENST00000219299 NUTM2BA6NNL0 878 aaPredicted RBP12.01□□□□□ -0.49
CCDC113-201ENST00000219299 NUTM2EB1AL46 878 aaPredicted RBP12.01□□□□□ -0.49
CCDC113-201ENST00000219299 PPP2R1AP30153 589 aa12.01□□□□□ -0.49
CCDC113-201ENST00000219299 TEFQ10587 303 aa12.01□□□□□ -0.49
CCDC113-201ENST00000219299 NUTM2AQ8IVF1 878 aaPredicted RBP12.01□□□□□ -0.49
CCDC113-201ENST00000219299 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
CCDC113-201ENST00000219299 RAPGEF4Q8WZA2 1011 aa12□□□□□ -0.49
CCDC113-201ENST00000219299 MS4A1P11836 297 aa12□□□□□ -0.49
CCDC113-201ENST00000219299 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
CCDC113-201ENST00000219299 ZFYVE16Q7Z3T8 1539 aa12□□□□□ -0.49
CCDC113-201ENST00000219299 PPP4R2Q9NY27 417 aa11.99□□□□□ -0.49
CCDC113-201ENST00000219299 RIPK4P57078 832 aa11.99□□□□□ -0.49
CCDC113-201ENST00000219299 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
CCDC113-201ENST00000219299 STRN4Q9NRL3 753 aa11.99□□□□□ -0.49
CCDC113-201ENST00000219299 STK31Q9BXU1 1019 aa11.99□□□□□ -0.49
CCDC113-201ENST00000219299 ADAMTS8Q9UP79 889 aa11.99□□□□□ -0.49
CCDC113-201ENST00000219299 SAMD9LQ8IVG5 1584 aa11.99□□□□□ -0.49
CCDC113-201ENST00000219299 RRS1Q15050 365 aaKnown RBP11.98□□□□□ -0.49
CCDC113-201ENST00000219299 SYTL4Q96C24 671 aaPredicted RBP11.98□□□□□ -0.49
CCDC113-201ENST00000219299 PRDM11Q9NQV5 511 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms