RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
CSNK2A1-201ENST00000217244 SLC26A8Q96RN1 970 aa11.1□□□□□ -0.63
CSNK2A1-201ENST00000217244 CGNL1Q0VF96 1302 aa11.1□□□□□ -0.63
CSNK2A1-201ENST00000217244 CEBPAP49715 358 aaPredicted RBP11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 SMC4Q9NTJ3 1288 aa11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 ASXL2Q76L83 1435 aa11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 ITPRIPQ8IWB1 547 aa11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 NGDNQ8NEJ9 315 aaKnown RBP11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 UPF2Q9HAU5 1272 aaKnown RBP11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 ERCC6L2Q5T890 1561 aa11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 PLCH2O75038 1416 aa11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 BRD4O60885 1362 aaPredicted RBP11.09□□□□□ -0.63
CSNK2A1-201ENST00000217244 BCAR3O75815 825 aa11.08□□□□□ -0.64
CSNK2A1-201ENST00000217244 PANK1Q8TE04 598 aa11.08□□□□□ -0.64
CSNK2A1-201ENST00000217244 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
CSNK2A1-201ENST00000217244 HSP90AA1P07900 732 aaKnown RBP11.08□□□□□ -0.64
CSNK2A1-201ENST00000217244 NOP58Q9Y2X3 529 aaKnown RBP11.08□□□□□ -0.64
CSNK2A1-201ENST00000217244 PDE3BQ13370 1112 aa11.07□□□□□ -0.64
CSNK2A1-201ENST00000217244 TCP11L2Q8N4U5 519 aa11.07□□□□□ -0.64
CSNK2A1-201ENST00000217244 C20orf194Q5TEA3 1177 aa11.07□□□□□ -0.64
CSNK2A1-201ENST00000217244 TESK2Q96S53 571 aa11.06□□□□□ -0.64
CSNK2A1-201ENST00000217244 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
CSNK2A1-201ENST00000217244 DNMT1P26358 1616 aaKnown RBP11.06□□□□□ -0.64
CSNK2A1-201ENST00000217244 PMFBP1Q8TBY8 1022 aa11.06□□□□□ -0.64
CSNK2A1-201ENST00000217244 TSR2Q969E8 191 aaKnown RBP11.06□□□□□ -0.64
CSNK2A1-201ENST00000217244 HDGFP51858 240 aaKnown RBP11.06□□□□□ -0.64
CSNK2A1-201ENST00000217244 CFAP65Q6ZU64 1925 aaKnown RBP11.05□□□□□ -0.64
CSNK2A1-201ENST00000217244 NOS1P29475 1434 aa11.05□□□□□ -0.64
CSNK2A1-201ENST00000217244 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
CSNK2A1-201ENST00000217244 TEX14Q8IWB6 1497 aa11.04□□□□□ -0.64
CSNK2A1-201ENST00000217244 RIPK4P57078 832 aa11.04□□□□□ -0.64
CSNK2A1-201ENST00000217244 ERICH6BQ5W0A0 696 aa11.03□□□□□ -0.64
CSNK2A1-201ENST00000217244 NECTIN2Q92692 538 aa11.03□□□□□ -0.64
CSNK2A1-201ENST00000217244 CDK19Q9BWU1 502 aa11.03□□□□□ -0.64
CSNK2A1-201ENST00000217244 MYH16Q9H6N6 1097 aa11.03□□□□□ -0.64
CSNK2A1-201ENST00000217244 DHX29Q7Z478 1369 aaKnown RBP11.02□□□□□ -0.65
CSNK2A1-201ENST00000217244 PRAG1Q86YV5 1406 aa11.02□□□□□ -0.65
CSNK2A1-201ENST00000217244 HAP1P54257 671 aaPredicted RBP11.02□□□□□ -0.65
CSNK2A1-201ENST00000217244 DIAPH1O60610 1272 aaKnown RBP11.02□□□□□ -0.65
CSNK2A1-201ENST00000217244 PDE4AP27815 886 aa11.02□□□□□ -0.65
CSNK2A1-201ENST00000217244 ITSN2Q9NZM3 1697 aa11.01□□□□□ -0.65
CSNK2A1-201ENST00000217244 E9PSI1 815 aa11.01□□□□□ -0.65
CSNK2A1-201ENST00000217244 RRS1Q15050 365 aaKnown RBP11.01□□□□□ -0.65
CSNK2A1-201ENST00000217244 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
CSNK2A1-201ENST00000217244 COG3Q96JB2 828 aa11.01□□□□□ -0.65
CSNK2A1-201ENST00000217244 DENND4BO75064 1496 aaPredicted RBP11.01□□□□□ -0.65
CSNK2A1-201ENST00000217244 AMPHP49418 695 aa11.01□□□□□ -0.65
CSNK2A1-201ENST00000217244 TPRNQ4KMQ1 711 aa11.01□□□□□ -0.65
CSNK2A1-201ENST00000217244 NSD3Q9BZ95 1437 aa11.01□□□□□ -0.65
CSNK2A1-201ENST00000217244 MBD5Q9P267 1494 aa11□□□□□ -0.65
CSNK2A1-201ENST00000217244 KDM5BQ9UGL1 1544 aa11□□□□□ -0.65
CSNK2A1-201ENST00000217244 SLC4A10Q6U841 1118 aa11□□□□□ -0.65
CSNK2A1-201ENST00000217244 ABCC10Q5T3U5 1492 aa11□□□□□ -0.65
CSNK2A1-201ENST00000217244 RUNDC1Q96C34 613 aa11□□□□□ -0.65
CSNK2A1-201ENST00000217244 ZNF428Q96B54 188 aa11□□□□□ -0.65
CSNK2A1-201ENST00000217244 SLKQ9H2G2 1235 aaPredicted RBP11□□□□□ -0.65
CSNK2A1-201ENST00000217244 WDR7Q9Y4E6 1490 aa10.99□□□□□ -0.65
CSNK2A1-201ENST00000217244 ABCC2Q92887 1545 aa10.99□□□□□ -0.65
CSNK2A1-201ENST00000217244 PER1O15534 1290 aaPredicted RBP10.98□□□□□ -0.65
CSNK2A1-201ENST00000217244 RTF1Q92541 710 aaKnown RBP10.98□□□□□ -0.65
CSNK2A1-201ENST00000217244 SLC52A1Q9NWF4 448 aa10.98□□□□□ -0.65
CSNK2A1-201ENST00000217244 PRKAR2BP31323 418 aa10.98□□□□□ -0.65
CSNK2A1-201ENST00000217244 CARD14Q9BXL6 1004 aa10.98□□□□□ -0.65
CSNK2A1-201ENST00000217244 LRRIQ1Q96JM4 1722 aa10.98□□□□□ -0.65
CSNK2A1-201ENST00000217244 NCKAP5LQ9HCH0 1330 aa10.98□□□□□ -0.65
CSNK2A1-201ENST00000217244 A2MP01023 1474 aa10.98□□□□□ -0.65
CSNK2A1-201ENST00000217244 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
CSNK2A1-201ENST00000217244 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
CSNK2A1-201ENST00000217244 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.97□□□□□ -0.65
CSNK2A1-201ENST00000217244 EXOSC9Q06265 439 aaKnown RBP10.97□□□□□ -0.65
CSNK2A1-201ENST00000217244 STAC3Q96MF2 364 aa10.97□□□□□ -0.65
CSNK2A1-201ENST00000217244 ABCA8O94911 1581 aa10.96□□□□□ -0.65
CSNK2A1-201ENST00000217244 XPCQ01831 940 aaPredicted RBP10.96□□□□□ -0.66
CSNK2A1-201ENST00000217244 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
CSNK2A1-201ENST00000217244 NME9Q86XW9 330 aa10.95□□□□□ -0.66
CSNK2A1-201ENST00000217244 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
CSNK2A1-201ENST00000217244 SMG6Q86US8 1419 aaKnown RBP10.95□□□□□ -0.66
CSNK2A1-201ENST00000217244 ADGRL2O95490 1459 aa10.95□□□□□ -0.66
CSNK2A1-201ENST00000217244 DCTN1Q14203 1278 aa10.95□□□□□ -0.66
CSNK2A1-201ENST00000217244 C14orf93Q9H972 538 aaKnown RBP10.95□□□□□ -0.66
CSNK2A1-201ENST00000217244 ZRANB1Q9UGI0 708 aa10.95□□□□□ -0.66
CSNK2A1-201ENST00000217244 TTC37Q6PGP7 1564 aa10.94□□□□□ -0.66
CSNK2A1-201ENST00000217244 RTN4Q9NQC3 1192 aaKnown RBP10.94□□□□□ -0.66
CSNK2A1-201ENST00000217244 DUOX2Q9NRD8 1548 aa10.94□□□□□ -0.66
CSNK2A1-201ENST00000217244 ARHGEF12Q9NZN5 1544 aa10.94□□□□□ -0.66
CSNK2A1-201ENST00000217244 IPO9Q96P70 1041 aaKnown RBP10.94□□□□□ -0.66
CSNK2A1-201ENST00000217244 C1orf115Q9H7X2 142 aa10.94□□□□□ -0.66
CSNK2A1-201ENST00000217244 EMILIN1Q9Y6C2 1016 aa10.94□□□□□ -0.66
CSNK2A1-201ENST00000217244 WWC1Q8IX03 1113 aa10.93□□□□□ -0.66
CSNK2A1-201ENST00000217244 SPATA31E1Q6ZUB1 1445 aa10.93□□□□□ -0.66
CSNK2A1-201ENST00000217244 SPINK5Q9NQ38 1064 aaPredicted RBP10.93□□□□□ -0.66
CSNK2A1-201ENST00000217244 SAMD9LQ8IVG5 1584 aa10.93□□□□□ -0.66
CSNK2A1-201ENST00000217244 NLRP6P59044 892 aa10.93□□□□□ -0.66
CSNK2A1-201ENST00000217244 ZKSCAN2Q63HK3 967 aa10.93□□□□□ -0.66
CSNK2A1-201ENST00000217244 CHD1O14646 1710 aa10.93□□□□□ -0.66
CSNK2A1-201ENST00000217244 SCAF11Q99590 1463 aaKnown RBP10.93□□□□□ -0.66
CSNK2A1-201ENST00000217244 DDRGK1Q96HY6 314 aa10.92□□□□□ -0.66
CSNK2A1-201ENST00000217244 RWDD1Q9H446 243 aaPredicted RBP10.92□□□□□ -0.66
CSNK2A1-201ENST00000217244 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms