RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 RIMBP3Q9UFD9 1639 aa21.09■□□□□ 0.97
SNAPC1-201ENST00000216294 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
SNAPC1-201ENST00000216294 NLRP13Q86W25 1043 aa21.09■□□□□ 0.97
SNAPC1-201ENST00000216294 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
SNAPC1-201ENST00000216294 CLTCL1P53675 1640 aa21.08■□□□□ 0.97
SNAPC1-201ENST00000216294 MLH3Q9UHC1 1453 aa21.07■□□□□ 0.96
SNAPC1-201ENST00000216294 FRMPD1Q5SYB0 1578 aa21.07■□□□□ 0.96
SNAPC1-201ENST00000216294 HECW2Q9P2P5 1572 aa21.07■□□□□ 0.96
SNAPC1-201ENST00000216294 C20orf194Q5TEA3 1177 aa21.06■□□□□ 0.96
SNAPC1-201ENST00000216294 LAS1LQ9Y4W2 734 aaKnown RBP21.06■□□□□ 0.96
SNAPC1-201ENST00000216294 NEO1Q92859 1461 aa21.06■□□□□ 0.96
SNAPC1-201ENST00000216294 GPRASP1Q5JY77 1395 aa21.06■□□□□ 0.96
SNAPC1-201ENST00000216294 TESK2Q96S53 571 aa21.05■□□□□ 0.96
SNAPC1-201ENST00000216294 PARD3Q8TEW0 1356 aa21.04■□□□□ 0.96
SNAPC1-201ENST00000216294 UGGT1Q9NYU2 1555 aa21.04■□□□□ 0.96
SNAPC1-201ENST00000216294 ABCA6Q8N139 1617 aa21.03■□□□□ 0.96
SNAPC1-201ENST00000216294 GGT6Q6P531 493 aa21.03■□□□□ 0.96
SNAPC1-201ENST00000216294 CRBNQ96SW2 442 aa21.03■□□□□ 0.96
SNAPC1-201ENST00000216294 EFCAB6Q5THR3 1501 aa21.02■□□□□ 0.96
SNAPC1-201ENST00000216294 PDE4AP27815 886 aa21.02■□□□□ 0.96
SNAPC1-201ENST00000216294 CEP152O94986 1710 aa21.02■□□□□ 0.96
SNAPC1-201ENST00000216294 PPRC1Q5VV67 1664 aaKnown RBP21.01■□□□□ 0.95
SNAPC1-201ENST00000216294 MAP3K4Q9Y6R4 1608 aa21.01■□□□□ 0.95
SNAPC1-201ENST00000216294 RNF17Q9BXT8 1623 aaKnown RBP21■□□□□ 0.95
SNAPC1-201ENST00000216294 ADAMTS8Q9UP79 889 aa20.99■□□□□ 0.95
SNAPC1-201ENST00000216294 MADDQ8WXG6 1647 aa20.98■□□□□ 0.95
SNAPC1-201ENST00000216294 LMTK2Q8IWU2 1503 aa20.97■□□□□ 0.95
SNAPC1-201ENST00000216294 LAMC1P11047 1609 aa20.97■□□□□ 0.95
SNAPC1-201ENST00000216294 FAM69CQ0P6D2 419 aa20.97■□□□□ 0.95
SNAPC1-201ENST00000216294 DIP2CQ9Y2E4 1556 aa20.94■□□□□ 0.94
SNAPC1-201ENST00000216294 GLI2P10070 1586 aa20.94■□□□□ 0.94
SNAPC1-201ENST00000216294 NPATQ14207 1427 aa20.94■□□□□ 0.94
SNAPC1-201ENST00000216294 YEATS2Q9ULM3 1422 aa20.94■□□□□ 0.94
SNAPC1-201ENST00000216294 RICTORQ6R327 1708 aa20.93■□□□□ 0.94
SNAPC1-201ENST00000216294 SLC4A3P48751 1232 aa20.93■□□□□ 0.94
SNAPC1-201ENST00000216294 BACH2Q9BYV9 841 aa20.92■□□□□ 0.94
SNAPC1-201ENST00000216294 WASHC2CQ9Y4E1 1318 aa20.92■□□□□ 0.94
SNAPC1-201ENST00000216294 COL17A1Q9UMD9 1497 aaPredicted RBP20.92■□□□□ 0.94
SNAPC1-201ENST00000216294 CCDC146Q8IYE0 955 aa20.91■□□□□ 0.94
SNAPC1-201ENST00000216294 DIP2BQ9P265 1576 aa20.91■□□□□ 0.94
SNAPC1-201ENST00000216294 TMF1P82094 1093 aa20.91■□□□□ 0.94
SNAPC1-201ENST00000216294 RTL5Q5HYW3 569 aaPredicted RBP20.91■□□□□ 0.94
SNAPC1-201ENST00000216294 ABCC3O15438 1527 aa20.9■□□□□ 0.94
SNAPC1-201ENST00000216294 TCERG1O14776 1098 aaKnown RBP20.9■□□□□ 0.94
SNAPC1-201ENST00000216294 CHGAP10645 457 aaKnown RBP20.89■□□□□ 0.93
SNAPC1-201ENST00000216294 MROH2AA6NES4 1674 aa20.88■□□□□ 0.93
SNAPC1-201ENST00000216294 ADGRF5Q8IZF2 1346 aa20.88■□□□□ 0.93
SNAPC1-201ENST00000216294 PLEKHH1Q9ULM0 1364 aa20.87■□□□□ 0.93
SNAPC1-201ENST00000216294 PDE3BQ13370 1112 aa20.87■□□□□ 0.93
SNAPC1-201ENST00000216294 NEURL4Q96JN8 1562 aa20.86■□□□□ 0.93
SNAPC1-201ENST00000216294 STAC3Q96MF2 364 aa20.86■□□□□ 0.93
SNAPC1-201ENST00000216294 KIF1BO60333 1816 aa20.85■□□□□ 0.93
SNAPC1-201ENST00000216294 CFAP65Q6ZU64 1925 aaKnown RBP20.85■□□□□ 0.93
SNAPC1-201ENST00000216294 PPP2R1AP30153 589 aa20.85■□□□□ 0.93
SNAPC1-201ENST00000216294 NEFMP07197 916 aa20.84■□□□□ 0.93
SNAPC1-201ENST00000216294 CFAP70Q5T0N1 1121 aa20.84■□□□□ 0.93
SNAPC1-201ENST00000216294 IQGAP1P46940 1657 aa20.84■□□□□ 0.93
SNAPC1-201ENST00000216294 KNSTRNQ9Y448 316 aa20.84■□□□□ 0.93
SNAPC1-201ENST00000216294 TSPOAP1O95153 1857 aa20.84■□□□□ 0.93
SNAPC1-201ENST00000216294 BLMP54132 1417 aaPredicted RBP20.83■□□□□ 0.93
SNAPC1-201ENST00000216294 MYOM2P54296 1465 aa20.83■□□□□ 0.93
SNAPC1-201ENST00000216294 SCAF11Q99590 1463 aaKnown RBP20.83■□□□□ 0.93
SNAPC1-201ENST00000216294 ADGRB3O60242 1522 aa20.83■□□□□ 0.93
SNAPC1-201ENST00000216294 SPINK5Q9NQ38 1064 aaPredicted RBP20.83■□□□□ 0.92
SNAPC1-201ENST00000216294 CAMSAP1Q5T5Y3 1602 aa20.82■□□□□ 0.92
SNAPC1-201ENST00000216294 WDR43Q15061 677 aaKnown RBP eCLIP20.81■□□□□ 0.92
SNAPC1-201ENST00000216294 NOS1P29475 1434 aa20.81■□□□□ 0.92
SNAPC1-201ENST00000216294 RTN4Q9NQC3 1192 aaKnown RBP20.81■□□□□ 0.92
SNAPC1-201ENST00000216294 DUSP27Q5VZP5 1158 aa20.8■□□□□ 0.92
SNAPC1-201ENST00000216294 SIGLEC1Q9BZZ2 1709 aa20.79■□□□□ 0.92
SNAPC1-201ENST00000216294 IFT172Q9UG01 1749 aa20.79■□□□□ 0.92
SNAPC1-201ENST00000216294 RGS3P49796 1198 aa20.79■□□□□ 0.92
SNAPC1-201ENST00000216294 AMER1Q5JTC6 1135 aaPredicted RBP20.78■□□□□ 0.92
SNAPC1-201ENST00000216294 IL27Q8NEV9 243 aa20.78■□□□□ 0.92
SNAPC1-201ENST00000216294 DMRT2Q9Y5R5 561 aa20.78■□□□□ 0.92
SNAPC1-201ENST00000216294 ZMYM4Q5VZL5 1548 aa20.77■□□□□ 0.92
SNAPC1-201ENST00000216294 KIAA1210Q9ULL0 1709 aa20.76■□□□□ 0.91
SNAPC1-201ENST00000216294 NRXN1Q9ULB1 1477 aa20.76■□□□□ 0.91
SNAPC1-201ENST00000216294 SYNMO15061 1565 aa20.75■□□□□ 0.91
SNAPC1-201ENST00000216294 BCAR3O75815 825 aa20.75■□□□□ 0.91
SNAPC1-201ENST00000216294 APAF1O14727 1248 aa20.75■□□□□ 0.91
SNAPC1-201ENST00000216294 MS4A1P11836 297 aa20.73■□□□□ 0.91
SNAPC1-201ENST00000216294 EIF3AQ14152 1382 aaKnown RBP20.73■□□□□ 0.91
SNAPC1-201ENST00000216294 NUTM2DQ5VT03 806 aaPredicted RBP20.73■□□□□ 0.91
SNAPC1-201ENST00000216294 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
SNAPC1-201ENST00000216294 TNNT2P45379 298 aaPredicted RBP20.72■□□□□ 0.91
SNAPC1-201ENST00000216294 GOLGA2Q08379 1002 aa20.72■□□□□ 0.91
SNAPC1-201ENST00000216294 ARHGAP31Q2M1Z3 1444 aa20.71■□□□□ 0.91
SNAPC1-201ENST00000216294 KDM2BQ8NHM5 1336 aa20.71■□□□□ 0.91
SNAPC1-201ENST00000216294 ZC3H13Q5T200 1668 aaKnown RBP20.71■□□□□ 0.91
SNAPC1-201ENST00000216294 PIK3C2GO75747 1445 aa20.7■□□□□ 0.9
SNAPC1-201ENST00000216294 PPLO60437 1756 aa20.7■□□□□ 0.9
SNAPC1-201ENST00000216294 PIK3C2BO00750 1634 aa20.7■□□□□ 0.9
SNAPC1-201ENST00000216294 NEUROD2Q15784 382 aa20.7■□□□□ 0.9
SNAPC1-201ENST00000216294 IDI1Q13907 227 aa20.69■□□□□ 0.9
SNAPC1-201ENST00000216294 ZNF521Q96K83 1311 aa20.67■□□□□ 0.9
SNAPC1-201ENST00000216294 SLFN5Q08AF3 891 aa20.66■□□□□ 0.9
SNAPC1-201ENST00000216294 FBXO31Q5XUX0 539 aaPredicted RBP20.66■□□□□ 0.9
SNAPC1-201ENST00000216294 TMEM132EQ6IEE7 984 aa20.66■□□□□ 0.9
SNAPC1-201ENST00000216294 RPGRIP1LQ68CZ1 1315 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms