RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W CUP9P41817 306 aa3.08□□□□□ -1.92
LCB5YLR260W PMT4P46971 762 aa3.08□□□□□ -1.92
LCB5YLR260W YJL043WP47053 257 aa3.08□□□□□ -1.92
LCB5YLR260W TIM44Q01852 431 aa3.08□□□□□ -1.92
LCB5YLR260W DYN2Q02647 92 aa3.08□□□□□ -1.92
LCB5YLR260W AIM34Q03673 198 aa3.08□□□□□ -1.92
LCB5YLR260W YET2Q04210 160 aa3.08□□□□□ -1.92
LCB5YLR260W YPR174CQ06616 221 aaPredicted RBP3.08□□□□□ -1.92
LCB5YLR260W RRS1Q08746 203 aaKnown RBP3.08□□□□□ -1.92
LCB5YLR260W YLR050CQ12155 161 aaKnown RBP3.08□□□□□ -1.92
LCB5YLR260W AGC1Q12482 902 aa3.08□□□□□ -1.92
LCB5YLR260W SEC22P22214 214 aa3.07□□□□□ -1.92
LCB5YLR260W LSB5P25369 354 aa3.07□□□□□ -1.92
LCB5YLR260W RPC19P28000 142 aaKnown RBP3.07□□□□□ -1.92
LCB5YLR260W YHK8P38776 514 aa3.07□□□□□ -1.92
LCB5YLR260W GEP4P38812 185 aa3.07□□□□□ -1.92
LCB5YLR260W RGI1P40043 161 aaPredicted RBP3.07□□□□□ -1.92
LCB5YLR260W PAC10P48363 199 aa3.07□□□□□ -1.92
LCB5YLR260W RBL2P48606 106 aaKnown RBP3.07□□□□□ -1.92
LCB5YLR260W SDT1P53078 280 aa3.07□□□□□ -1.92
LCB5YLR260W PDR17P53844 350 aa3.07□□□□□ -1.92
LCB5YLR260W YLR126CQ12288 251 aa3.07□□□□□ -1.92
LCB5YLR260W UTP23Q12339 254 aaKnown RBP3.07□□□□□ -1.92
LCB5YLR260W CTA1P15202 515 aa3.07□□□□□ -1.92
LCB5YLR260W OAR1P35731 278 aa3.07□□□□□ -1.92
LCB5YLR260W MRPL28P36527 147 aa3.07□□□□□ -1.92
LCB5YLR260W YCR041WP37265 110 aa3.07□□□□□ -1.92
LCB5YLR260W MOH1P38191 138 aa3.07□□□□□ -1.92
LCB5YLR260W YBR062CP38239 180 aa3.07□□□□□ -1.92
LCB5YLR260W OM14P38325 134 aa3.07□□□□□ -1.92
LCB5YLR260W KRE29P40026 464 aa3.07□□□□□ -1.92
LCB5YLR260W UBC13P52490 153 aa3.07□□□□□ -1.92
LCB5YLR260W YPR098CQ06089 161 aa3.07□□□□□ -1.92
LCB5YLR260W TPO3Q06451 622 aa3.07□□□□□ -1.92
LCB5YLR260W YOR376WQ08900 122 aa3.07□□□□□ -1.92
LCB5YLR260W FYV7Q12247 151 aa3.07□□□□□ -1.92
LCB5YLR260W YPL119C-AQ3E751 87 aa3.07□□□□□ -1.92
LCB5YLR260W YPR096CO13587 100 aa3.06□□□□□ -1.92
LCB5YLR260W RPL7AP05737 244 aaKnown RBP3.06□□□□□ -1.92
LCB5YLR260W MCK1P21965 375 aaKnown RBP3.06□□□□□ -1.92
LCB5YLR260W URE2P23202 354 aaKnown RBP3.06□□□□□ -1.92
LCB5YLR260W YCR023CP25351 611 aa3.06□□□□□ -1.92
LCB5YLR260W SEC17P32602 292 aa3.06□□□□□ -1.92
LCB5YLR260W YEF1P32622 495 aa3.06□□□□□ -1.92
LCB5YLR260W SPC34P36131 295 aa3.06□□□□□ -1.92
LCB5YLR260W AIM2P39721 246 aa3.06□□□□□ -1.92
LCB5YLR260W RMD6P39975 231 aa3.06□□□□□ -1.92
LCB5YLR260W PSA1P41940 361 aaKnown RBP3.06□□□□□ -1.92
LCB5YLR260W VHT1P53241 593 aa3.06□□□□□ -1.92
LCB5YLR260W SYF2P53277 215 aaPredicted RBP3.06□□□□□ -1.92
LCB5YLR260W MPA43P53583 542 aaPredicted RBP3.06□□□□□ -1.92
LCB5YLR260W YNL010WP53981 241 aaKnown RBP3.06□□□□□ -1.92
LCB5YLR260W CWC27Q02770 301 aa3.06□□□□□ -1.92
LCB5YLR260W LGE1Q02796 332 aaKnown RBP3.06□□□□□ -1.92
LCB5YLR260W YMR279CQ03263 540 aa3.06□□□□□ -1.92
LCB5YLR260W BET5Q03630 159 aa3.06□□□□□ -1.92
LCB5YLR260W SSK1Q07084 712 aa3.06□□□□□ -1.92
LCB5YLR260W RPL7BQ12213 244 aaKnown RBP3.06□□□□□ -1.92
LCB5YLR260W FOL3Q12676 427 aaPredicted RBP3.06□□□□□ -1.92
LCB5YLR260W MAK32P23060 363 aa3.05□□□□□ -1.92
LCB5YLR260W EXG1P23776 448 aaKnown RBP3.05□□□□□ -1.92
LCB5YLR260W COQ3P27680 312 aa3.05□□□□□ -1.92
LCB5YLR260W UGX2P32772 223 aa3.05□□□□□ -1.92
LCB5YLR260W ECM33P38248 429 aaKnown RBP3.05□□□□□ -1.92
LCB5YLR260W IMD3P50095 523 aaKnown RBP3.05□□□□□ -1.92
LCB5YLR260W YPS5P53057 165 aa3.05□□□□□ -1.92
LCB5YLR260W TPC1P53257 314 aa3.05□□□□□ -1.92
LCB5YLR260W PAL1Q05518 499 aaKnown RBP3.05□□□□□ -1.92
LCB5YLR260W DPP1Q05521 289 aa3.05□□□□□ -1.92
LCB5YLR260W MRX4Q12467 430 aa3.05□□□□□ -1.92
LCB5YLR260W UTP20P35194 2493 aaKnown RBP3.05□□□□□ -1.92
LCB5YLR260W TRA1P38811 3744 aa3.05□□□□□ -1.92
LCB5YLR260W RPL25P04456 142 aaKnown RBP3.05□□□□□ -1.92
LCB5YLR260W CNB1P25296 175 aa3.05□□□□□ -1.92
LCB5YLR260W SNC1P31109 117 aa3.05□□□□□ -1.92
LCB5YLR260W TIR2P33890 251 aa3.05□□□□□ -1.92
LCB5YLR260W SRY1P36007 326 aa3.05□□□□□ -1.92
LCB5YLR260W MRPL3P36516 390 aa3.05□□□□□ -1.92
LCB5YLR260W PRS3P38689 320 aaKnown RBP3.05□□□□□ -1.92
LCB5YLR260W RRG9P40156 214 aa3.05□□□□□ -1.92
LCB5YLR260W YIL169CP40442 995 aa3.05□□□□□ -1.92
LCB5YLR260W COS1P53822 381 aa3.05□□□□□ -1.92
LCB5YLR260W HCH1P53834 153 aa3.05□□□□□ -1.92
LCB5YLR260W ARL3Q02804 198 aa3.05□□□□□ -1.92
LCB5YLR260W YDL218WQ07629 317 aa3.05□□□□□ -1.92
LCB5YLR260W YOL131WQ08270 108 aa3.05□□□□□ -1.92
LCB5YLR260W MDM32Q12171 622 aa3.05□□□□□ -1.92
LCB5YLR260W YOR304C-AO14468 76 aa3.04□□□□□ -1.92
LCB5YLR260W STE7P06784 515 aa3.04□□□□□ -1.92
LCB5YLR260W CAP2P13517 287 aa3.04□□□□□ -1.92
LCB5YLR260W PRE7P23724 241 aaKnown RBP3.04□□□□□ -1.92
LCB5YLR260W YCR007CP25354 239 aa3.04□□□□□ -1.92
LCB5YLR260W ARO7P32178 256 aa3.04□□□□□ -1.92
LCB5YLR260W LHP1P33399 275 aaKnown RBP3.04□□□□□ -1.92
LCB5YLR260W SIP2P34164 415 aaKnown RBP3.04□□□□□ -1.92
LCB5YLR260W FRE2P36033 711 aa3.04□□□□□ -1.92
LCB5YLR260W MTC4P38335 694 aaKnown RBP3.04□□□□□ -1.92
LCB5YLR260W SLM6P38343 150 aa3.04□□□□□ -1.92
LCB5YLR260W CHS7P38843 316 aa3.04□□□□□ -1.92
LCB5YLR260W MIT1P40002 666 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms