RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NAA25Q14CX7 972 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 FASTKD3Q14CZ7 662 aaKnown RBP15.5■□□□□ 0.07
SCARB2-221ENST00000640341 GRK7Q8WTQ7 553 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 LBHD1Q9BQE6 289 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-221ENST00000640341 PITPNM3Q9BZ71 974 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 UMODL1Q5DID0 1318 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 CNTNAP1P78357 1384 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 ATP5DP30049 168 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 ITIH4Q14624 930 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 ANKMY2Q8IV38 441 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 C12orf56Q8IXR9 622 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-221ENST00000640341 SERPINB12Q96P63 405 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 CCDC77Q9BR77 488 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 RPAP3Q9H6T3 665 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-221ENST00000640341 PCDHB2Q9Y5E7 798 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 LTBP4Q8N2S1 1624 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 DNAJC8O75937 253 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-221ENST00000640341 ALDH5A1P51649 535 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-221ENST00000640341 CLNS1AP54105 237 aaKnown RBP15.5■□□□□ 0.07
SCARB2-221ENST00000640341 FKBP1AP62942 108 aaKnown RBP15.5■□□□□ 0.07
SCARB2-221ENST00000640341 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 SCARA5Q6ZMJ2 495 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 FITM2Q8N6M3 262 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 AKT1S1Q96B36 256 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 RNF146Q9NTX7 359 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 KLHL14Q9P2G3 628 aa15.5■□□□□ 0.07
SCARB2-221ENST00000640341 MTA2O94776 668 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 POLGP54098 1239 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 SPDYE2Q495Y8 402 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 DDX27Q96GQ7 796 aaKnown RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 ROPN1BQ9BZX4 212 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 ROPN1Q9HAT0 212 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 SLCO1B3Q9NPD5 702 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 PXMP2Q9NR77 195 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 DNPEPQ9ULA0 475 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 PTPRJQ12913 1337 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 EGFRP00533 1210 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 NR3C2P08235 984 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 MAPTP10636 758 aaKnown RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 GHRP10912 638 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 IVDP26440 423 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 STRN3Q13033 797 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 GPS1Q13098 491 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 TDRD10Q5VZ19 366 aaKnown RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 ZNF449Q6P9G9 518 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 DCUN1D2Q6PH85 259 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 ZBTB33Q86T24 672 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 TARS2Q9BW92 718 aaKnown RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 MOV10L1Q9BXT6 1211 aaKnown RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 MYPNQ86TC9 1320 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 KRT1P04264 644 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 UNGP13051 313 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 ARSEP51690 589 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 JAK3P52333 1124 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 NOP14P78316 857 aaKnown RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 KRT76Q01546 638 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 PRKCEQ02156 737 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 SMTNL2Q2TAL5 461 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 PREPLQ4J6C6 727 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 VSIG1Q86XK7 387 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 CCDC60Q8IWA6 550 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 RHOT1Q8IXI2 618 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 ZBED8Q8IZ13 594 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 CCDC89Q8N998 374 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 KCNV2Q8TDN2 545 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 P3H4Q92791 437 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 AGO2Q9UKV8 859 aaKnown RBP15.49■□□□□ 0.07
SCARB2-221ENST00000640341 SLC12A4Q9UP95 1085 aa15.49■□□□□ 0.07
SCARB2-221ENST00000640341 LTBP1Q14766 1721 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 KRT16P08779 473 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 POTEJP0CG39 1038 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 MAGEA4P43358 317 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 NCALDP61601 193 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 PRKG1Q13976 671 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 PAXIP1Q6ZW49 1069 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-221ENST00000640341 AGAP11Q8TF27 550 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 PDGFDQ9GZP0 370 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-221ENST00000640341 ALG13Q9NP73 1137 aaKnown RBP15.48■□□□□ 0.07
SCARB2-221ENST00000640341 RBAKQ9NYW8 714 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-221ENST00000640341 LRRD1A4D1F6 860 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 GOLGA8RI6L899 631 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 SGK1O00141 431 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 WNT10BO00744 389 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 MGRN1O60291 552 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 PEX10O60683 326 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 ZBED4O75132 1171 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 STYK1Q6J9G0 422 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 MFSD5Q6N075 450 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 MIS18BP1Q6P0N0 1132 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 ARHGEF18Q6ZSZ5 1173 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 DPH6Q7L8W6 267 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 SLC17A8Q8NDX2 589 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 TMEM237Q96Q45 408 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 KLF6Q99612 283 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-221ENST00000640341 ETNK1Q9HBU6 452 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 ANKRD31Q8N7Z5 1873 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 CDH16O75309 829 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 PROSCO94903 275 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms