RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 TRIM8Q9BZR9 551 aa6.84□□□□□ -1.31
SCARB2-217ENST00000639324 VTA1Q9NP79 307 aa6.84□□□□□ -1.31
SCARB2-217ENST00000639324 HECAQ9UBI9 543 aaPredicted RBP6.84□□□□□ -1.31
SCARB2-217ENST00000639324 MRFAP1Q9Y605 127 aa6.84□□□□□ -1.31
SCARB2-217ENST00000639324 KIF13BQ9NQT8 1826 aa6.84□□□□□ -1.31
SCARB2-217ENST00000639324 C4AP0C0L4 1744 aa6.84□□□□□ -1.31
SCARB2-217ENST00000639324 ITGB4P16144 1822 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 PASKQ96RG2 1323 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 CFBP00751 764 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 KCNA3P22001 575 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 ACRV1P26436 265 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 ALDH6A1Q02252 535 aaKnown RBP6.83□□□□□ -1.32
SCARB2-217ENST00000639324 HGFACQ04756 655 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 ADCY2Q08462 1091 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 DCTN1Q14203 1278 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 WDR43Q15061 677 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCARB2-217ENST00000639324 RALBP1Q15311 655 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 DEFB115Q30KQ5 88 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 USP30Q70CQ3 517 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 PNMA8AQ86V59 439 aaPredicted RBP6.83□□□□□ -1.32
SCARB2-217ENST00000639324 CHFRQ96EP1 664 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 MAML3Q96JK9 1138 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 FOXB1Q99853 325 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 MYL10Q9BUA6 226 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 BTBD2Q9BX70 525 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 CSRNP2Q9H175 543 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 C12orf65Q9H3J6 166 aaKnown RBP6.83□□□□□ -1.32
SCARB2-217ENST00000639324 MKS1Q9NXB0 559 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 FBXO10Q9UK96 956 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 SPEF1Q9Y4P9 236 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 UBR3Q6ZT12 1888 aa6.83□□□□□ -1.32
SCARB2-217ENST00000639324 WDR33Q9C0J8 1336 aaKnown RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 SHTN1A0MZ66 631 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 KCNQ3O43525 872 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 CA12O43570 354 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 PRPF6O94906 941 aaKnown RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 CAMTA2O94983 1202 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 CT47B1P0C2W7 299 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 MSX2P35548 267 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 IARSP41252 1262 aaKnown RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 ECE1P42892 770 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 PIP4K2AP48426 406 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 NEK2P51955 445 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 TTF1Q15361 905 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 TMEM200BQ69YZ2 307 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 PRR5LQ6MZQ0 368 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 CCDC62Q6P9F0 684 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 CLEC4GQ6UXB4 293 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 RTN4RL1Q86UN2 441 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 CXorf67Q86X51 503 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 NGEFQ8N5V2 710 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 AMER2Q8N7J2 671 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 TGFBRAP1Q8WUH2 860 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 FOXRED1Q96CU9 486 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 MASTLQ96GX5 879 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 TMX4Q9H1E5 349 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 TAOK3Q9H2K8 898 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 IKZF4Q9H2S9 585 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 PLA2G3Q9NZ20 509 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 TSPYL4Q9UJ04 414 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 NIP7Q9Y221 180 aaKnown RBP eCLIP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 USP16Q9Y5T5 823 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 TAF1LQ8IZX4 1826 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 ARFGEF1Q9Y6D6 1849 aa6.82□□□□□ -1.32
SCARB2-217ENST00000639324 N4BP2Q86UW6 1770 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-217ENST00000639324 KIAA1551Q9HCM1 1747 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 GABRDO14764 452 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 XPOTO43592 962 aaKnown RBP6.81□□□□□ -1.32
SCARB2-217ENST00000639324 SNUPNO95149 360 aaKnown RBP6.81□□□□□ -1.32
SCARB2-217ENST00000639324 PRLP01236 227 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 CLEC2LP0C7M8 214 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 APEX1P27695 318 aaKnown RBP6.81□□□□□ -1.32
SCARB2-217ENST00000639324 RPS19P39019 145 aaKnown RBP6.81□□□□□ -1.32
SCARB2-217ENST00000639324 MRE11P49959 708 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 EPHB1P54762 984 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 ERVK-21P61565 698 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 ACAP2Q15057 778 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 UGT8Q16880 541 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 BCL6BQ8N143 479 aaPredicted RBP6.81□□□□□ -1.32
SCARB2-217ENST00000639324 CHMP4CQ96CF2 233 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 FAM89AQ96GI7 184 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 NYXQ9GZU5 481 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 AGO3Q9H9G7 860 aaKnown RBP6.81□□□□□ -1.32
SCARB2-217ENST00000639324 TLR9Q9NR96 1032 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 DNAJC28Q9NX36 388 aa6.81□□□□□ -1.32
SCARB2-217ENST00000639324 RRP7AQ9Y3A4 280 aaKnown RBP6.81□□□□□ -1.32
SCARB2-217ENST00000639324 MYBBP1AQ9BQG0 1328 aaKnown RBP6.8□□□□□ -1.32
SCARB2-217ENST00000639324 A0A0G2JNJ9 132 aa6.8□□□□□ -1.32
SCARB2-217ENST00000639324 K7ESF4 209 aa6.8□□□□□ -1.32
SCARB2-217ENST00000639324 MYL6BP14649 208 aa6.8□□□□□ -1.32
SCARB2-217ENST00000639324 COL5A3P25940 1745 aaPredicted RBP6.8□□□□□ -1.32
SCARB2-217ENST00000639324 RGS3P49796 1198 aa6.8□□□□□ -1.32
SCARB2-217ENST00000639324 RIPK4P57078 832 aa6.8□□□□□ -1.32
SCARB2-217ENST00000639324 TJP1Q07157 1748 aa6.8□□□□□ -1.32
SCARB2-217ENST00000639324 MAP3K12Q12852 859 aa6.8□□□□□ -1.32
SCARB2-217ENST00000639324 DDX10Q13206 875 aaKnown RBP6.8□□□□□ -1.32
SCARB2-217ENST00000639324 CCDC93Q567U6 631 aa6.8□□□□□ -1.32
SCARB2-217ENST00000639324 CT83Q5H943 113 aa6.8□□□□□ -1.32
SCARB2-217ENST00000639324 KIAA1841Q6NSI8 718 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms