RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CORO1BQ9BR76 489 aa18.39■□□□□ 0.53
SMN2-216ENST00000638794 REEP2Q9BRK0 252 aa18.39■□□□□ 0.53
SMN2-216ENST00000638794 DDX23Q9BUQ8 820 aaKnown RBP18.39■□□□□ 0.53
SMN2-216ENST00000638794 GDE1Q9NZC3 331 aa18.39■□□□□ 0.53
SMN2-216ENST00000638794 LARSQ9P2J5 1176 aaKnown RBP18.39■□□□□ 0.53
SMN2-216ENST00000638794 INSL5Q9Y5Q6 135 aa18.39■□□□□ 0.53
SMN2-216ENST00000638794 EP300Q09472 2414 aaPredicted RBP18.38■□□□□ 0.53
SMN2-216ENST00000638794 PATJQ8NI35 1801 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 KANSL1LA0AUZ9 987 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 H0YCG3 227 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 ECI2O75521 394 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 PFKPQ01813 784 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 PRKCQQ04759 706 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 SLC44A4Q53GD3 710 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 PRSS36Q5K4E3 855 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 TPGS2Q68CL5 300 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 HAUS6Q7Z4H7 955 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 C1orf210Q8IVY1 113 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 ADSSL1Q8N142 457 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 APPL2Q8NEU8 664 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 KCNN1Q92952 543 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 TCEAL4Q96EI5 215 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 PLA2G2FQ9BZM2 168 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 PLEKHA5Q9HAU0 1116 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 ODF2LQ9ULJ1 636 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 PCDHB8Q9UN66 801 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 SMC3Q9UQE7 1217 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 R4GN57 208 aa18.38■□□□□ 0.53
SMN2-216ENST00000638794 TTC26A0AVF1 554 aa18.37■□□□□ 0.53
SMN2-216ENST00000638794 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
SMN2-216ENST00000638794 CLTAP09496 248 aa18.37■□□□□ 0.53
SMN2-216ENST00000638794 UBA7P41226 1012 aa18.37■□□□□ 0.53
SMN2-216ENST00000638794 TNFSF9P41273 254 aa18.37■□□□□ 0.53
SMN2-216ENST00000638794 ADCY1Q08828 1119 aa18.37■□□□□ 0.53
SMN2-216ENST00000638794 DHX8Q14562 1220 aaKnown RBP18.37■□□□□ 0.53
SMN2-216ENST00000638794 GPBP1Q86WP2 473 aa18.37■□□□□ 0.53
SMN2-216ENST00000638794 KIF12Q96FN5 646 aa18.37■□□□□ 0.53
SMN2-216ENST00000638794 CALML4Q96GE6 196 aa18.37■□□□□ 0.53
SMN2-216ENST00000638794 M0QZQ0 153 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 NRG2O14511 850 aaPredicted RBP18.36■□□□□ 0.53
SMN2-216ENST00000638794 HNRNPDLO14979 420 aaKnown RBP18.36■□□□□ 0.53
SMN2-216ENST00000638794 SLC26A4O43511 780 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 CPB1P15086 417 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 ANK1P16157 1881 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 LRPAP1P30533 357 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 CCR2P41597 374 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 MCM2P49736 904 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 LIG4P49917 911 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 PPP2R3AQ06190 1150 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 UBXN2BQ14CS0 331 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 ZBTB6Q15916 424 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 ZBTB41Q5SVQ8 909 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
SMN2-216ENST00000638794 TANGO2Q6ICL3 276 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 BLOC1S4Q9NUP1 217 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 AFF4Q9UHB7 1163 aaKnown RBP18.36■□□□□ 0.53
SMN2-216ENST00000638794 TBX20Q9UMR3 447 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 MTF2Q9Y483 593 aaPredicted RBP18.36■□□□□ 0.53
SMN2-216ENST00000638794 DMXL1Q9Y485 3027 aa18.36■□□□□ 0.53
SMN2-216ENST00000638794 LACTBL1A8MY62 500 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 K7ENM7 598 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 FAM189A1O60320 539 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 SP9P0CG40 484 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 CYP3A5P20815 502 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 CD72P21854 359 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 FCARP24071 287 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 MARCKSP29966 332 aaPredicted RBP18.35■□□□□ 0.53
SMN2-216ENST00000638794 GUCY2FP51841 1108 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 ZNF131P52739 623 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 GRIN1Q05586 938 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 TWF1Q12792 350 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 KARSQ15046 597 aaKnown RBP18.35■□□□□ 0.53
SMN2-216ENST00000638794 ENOX2Q16206 610 aaKnown RBP18.35■□□□□ 0.53
SMN2-216ENST00000638794 RNF19BQ6ZMZ0 732 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 PDZD4Q76G19 769 aaPredicted RBP18.35■□□□□ 0.53
SMN2-216ENST00000638794 ELMOD1Q8N336 334 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 ELSPBP1Q96BH3 223 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 UPF2Q9HAU5 1272 aaKnown RBP18.35■□□□□ 0.53
SMN2-216ENST00000638794 PARVGQ9HBI0 331 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 LTB4R2Q9NPC1 389 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 CEP72Q9P209 647 aa18.35■□□□□ 0.53
SMN2-216ENST00000638794 UBQLN1Q9UMX0 589 aaKnown RBP18.35■□□□□ 0.53
SMN2-216ENST00000638794 TIMM13Q9Y5L4 95 aaPredicted RBP18.35■□□□□ 0.53
SMN2-216ENST00000638794 ZNF197O14709 1029 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 FAM13AO94988 1023 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 OAZ2O95190 189 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 PIGRP01833 764 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 LMNAP02545 664 aaKnown RBP18.34■□□□□ 0.53
SMN2-216ENST00000638794 PLCG1P19174 1290 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 AARSP49588 968 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMN2-216ENST00000638794 YWHAHQ04917 246 aaPredicted RBP18.34■□□□□ 0.53
SMN2-216ENST00000638794 MCM6Q14566 821 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 FAM78AQ5JUQ0 283 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 IQCEQ6IPM2 695 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 TPRG1Q6ZUI0 275 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 MAML2Q8IZL2 1156 aaPredicted RBP18.34■□□□□ 0.53
SMN2-216ENST00000638794 HS6ST3Q8IZP7 471 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 KCNG4Q8TDN1 519 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 BCO2Q9BYV7 579 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms