RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 PTCRAQ6ISU1 281 aaPredicted RBP23.6■■□□□ 1.37
SCN1B-206ENST00000638536 ANKRD54Q6NXT1 300 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.6■■□□□ 1.37
SCN1B-206ENST00000638536 HS2ST1Q7LGA3 356 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 BEST2Q8NFU1 509 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 SPATA20Q8TB22 786 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 PIK3R5Q8WYR1 880 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 NECAB3Q96P71 396 aaPredicted RBP23.6■■□□□ 1.37
SCN1B-206ENST00000638536 TSPAN18Q96SJ8 248 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 CLSTN3Q9BQT9 956 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 CD207Q9UJ71 328 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 NUB1Q9Y5A7 615 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 ANO9A1A5B4 782 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 IL18RAPO95256 599 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 SPATA31D3P0C874 917 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 SPATA31D4Q6ZUB0 917 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 PALB2Q86YC2 1186 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 C12orf76Q8N812 135 aaPredicted RBP23.59■■□□□ 1.37
SCN1B-206ENST00000638536 SMRP1Q8NCR6 262 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 S1PR5Q9H228 398 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 DPP3Q9NY33 737 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 SSX2IPQ9Y2D8 614 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 ZNF233A6NK53 670 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 PIRO00625 290 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 MBTPS2O43462 519 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 MCM4P33991 863 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 PSMD5Q16401 504 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 SNRNP35Q16560 246 aaKnown RBP23.59■■□□□ 1.37
SCN1B-206ENST00000638536 C12orf56Q8IXR9 622 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 SUSD3Q96L08 255 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 GZF1Q9H116 711 aaPredicted RBP23.59■■□□□ 1.37
SCN1B-206ENST00000638536 FNIP2Q9P278 1114 aa23.59■■□□□ 1.37
SCN1B-206ENST00000638536 C2orf16Q68DN1 1984 aa23.58■■□□□ 1.37
SCN1B-206ENST00000638536 KIAA0391O15091 583 aaKnown RBP23.58■■□□□ 1.36
SCN1B-206ENST00000638536 XPOTO43592 962 aaKnown RBP23.58■■□□□ 1.36
SCN1B-206ENST00000638536 UBE2HP62256 183 aa23.58■■□□□ 1.36
SCN1B-206ENST00000638536 SNRPFP62306 86 aaKnown RBP23.58■■□□□ 1.36
SCN1B-206ENST00000638536 TFAMQ00059 246 aaKnown RBP23.58■■□□□ 1.36
SCN1B-206ENST00000638536 GPR65Q8IYL9 337 aa23.58■■□□□ 1.36
SCN1B-206ENST00000638536 XXYLT1Q8NBI6 393 aa23.58■■□□□ 1.36
SCN1B-206ENST00000638536 CXorf38Q8TB03 319 aa23.58■■□□□ 1.36
SCN1B-206ENST00000638536 CCDC47Q96A33 483 aaKnown RBP23.58■■□□□ 1.36
SCN1B-206ENST00000638536 COL25A1Q9BXS0 654 aaPredicted RBP23.58■■□□□ 1.36
SCN1B-206ENST00000638536 DMAC2Q9NW81 257 aa23.58■■□□□ 1.36
SCN1B-206ENST00000638536 TIMM13Q9Y5L4 95 aaPredicted RBP23.58■■□□□ 1.36
SCN1B-206ENST00000638536 TRAPPC3O43617 180 aa23.57■■□□□ 1.36
SCN1B-206ENST00000638536 KINO60870 393 aaKnown RBP23.57■■□□□ 1.36
SCN1B-206ENST00000638536 AARSP49588 968 aaKnown RBP eCLIP23.57■■□□□ 1.36
SCN1B-206ENST00000638536 LILRA4P59901 499 aa23.57■■□□□ 1.36
SCN1B-206ENST00000638536 VARS2Q5ST30 1063 aaKnown RBP23.57■■□□□ 1.36
SCN1B-206ENST00000638536 ISM2Q6H9L7 571 aa23.57■■□□□ 1.36
SCN1B-206ENST00000638536 C1orf127Q8N9H9 656 aa23.57■■□□□ 1.36
SCN1B-206ENST00000638536 OR5B17Q8NGF7 314 aa23.57■■□□□ 1.36
SCN1B-206ENST00000638536 PLEKHO2Q8TD55 490 aa23.57■■□□□ 1.36
SCN1B-206ENST00000638536 CASP10Q92851 521 aa23.57■■□□□ 1.36
SCN1B-206ENST00000638536 POP1Q99575 1024 aaKnown RBP23.57■■□□□ 1.36
SCN1B-206ENST00000638536 FSD2A1L4K1 749 aa23.56■■□□□ 1.36
SCN1B-206ENST00000638536 PDXKO00764 312 aa23.56■■□□□ 1.36
SCN1B-206ENST00000638536 TGM5O43548 720 aa23.56■■□□□ 1.36
SCN1B-206ENST00000638536 ADH1AP07327 375 aa23.56■■□□□ 1.36
SCN1B-206ENST00000638536 CASP4P49662 377 aa23.56■■□□□ 1.36
SCN1B-206ENST00000638536 CLEC17AQ6ZS10 378 aa23.56■■□□□ 1.36
SCN1B-206ENST00000638536 ADAMTS19Q8TE59 1207 aa23.56■■□□□ 1.36
SCN1B-206ENST00000638536 CCDC34Q96HJ3 373 aa23.56■■□□□ 1.36
SCN1B-206ENST00000638536 MTMR12Q9C0I1 747 aa23.56■■□□□ 1.36
SCN1B-206ENST00000638536 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.56■■□□□ 1.36
SCN1B-206ENST00000638536 TSC2P49815 1807 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 M0QZQ0 153 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 WEE2P0C1S8 567 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 MRPL58Q14197 206 aaKnown RBP23.55■■□□□ 1.36
SCN1B-206ENST00000638536 LILRA6Q6PI73 481 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 PPFIBP1Q86W92 1011 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 GUF1Q8N442 669 aaKnown RBP23.55■■□□□ 1.36
SCN1B-206ENST00000638536 SMARCE1Q969G3 411 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 GSDMAQ96QA5 445 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 CGNQ9P2M7 1197 aaKnown RBP23.55■■□□□ 1.36
SCN1B-206ENST00000638536 MTRRQ9UBK8 725 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 USP15Q9Y4E8 981 aaPredicted RBP23.55■■□□□ 1.36
SCN1B-206ENST00000638536 TRIOO75962 3097 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 EXOC3O60645 756 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 ITGB3P05106 788 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 OR1D2P34982 312 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 PRCPP42785 496 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 CYP24A1Q07973 514 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 SMAD4Q13485 552 aaKnown RBP23.55■■□□□ 1.36
SCN1B-206ENST00000638536 NT5DC4Q86YG4 428 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 ELOA2Q8IYF1 753 aaPredicted RBP23.55■■□□□ 1.36
SCN1B-206ENST00000638536 BORCS6Q96GS4 357 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 KIAA1586Q9HCI6 787 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 MAN1C1Q9NR34 630 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 SIX4Q9UIU6 781 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 TRAF3IP3Q9Y228 551 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 CDY1Q9Y6F8 540 aa23.55■■□□□ 1.36
SCN1B-206ENST00000638536 SYN3O14994 580 aa23.54■■□□□ 1.36
SCN1B-206ENST00000638536 TBC1D4O60343 1298 aa23.54■■□□□ 1.36
SCN1B-206ENST00000638536 GLUD1P00367 558 aa23.54■■□□□ 1.36
SCN1B-206ENST00000638536 NR3C1P04150 777 aa23.54■■□□□ 1.36
SCN1B-206ENST00000638536 RARS2Q5T160 578 aaKnown RBP23.54■■□□□ 1.36
SCN1B-206ENST00000638536 CCDC127Q96BQ5 260 aa23.54■■□□□ 1.36
SCN1B-206ENST00000638536 SENP8Q96LD8 212 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms