RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 TSPYL2Q9H2G4 693 aaPredicted RBP11.08□□□□□ -0.64
LINC00598-216ENST00000638163 HIPK3Q9H422 1215 aa11.08□□□□□ -0.64
LINC00598-216ENST00000638163 NXF3Q9H4D5 531 aaKnown RBP11.08□□□□□ -0.64
LINC00598-216ENST00000638163 HAUS4Q9H6D7 363 aa11.08□□□□□ -0.64
LINC00598-216ENST00000638163 PARP2Q9UGN5 583 aa11.08□□□□□ -0.64
LINC00598-216ENST00000638163 KIAA1257Q9ULG3 409 aa11.08□□□□□ -0.64
LINC00598-216ENST00000638163 PPP2R2CQ9Y2T4 447 aa11.08□□□□□ -0.64
LINC00598-216ENST00000638163 SOWAHDA6NJG2 315 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 MED7O43513 233 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 PQBP1O60828 265 aaKnown RBP11.07□□□□□ -0.64
LINC00598-216ENST00000638163 VNN1O95497 513 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 CXCL10P02778 98 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 ITGB3P05106 788 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 THP07101 528 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 NFICP08651 508 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 KRT19P08727 400 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 PAEPP09466 180 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 GZMAP12544 262 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 LRPAP1P30533 357 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 GRIK3Q13003 919 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 IFI16Q16666 785 aaKnown RBP11.07□□□□□ -0.64
LINC00598-216ENST00000638163 SEZ6Q53EL9 994 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 PLEKHG4Q58EX7 1191 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 HGSNATQ68CP4 663 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 GLB1LQ6UWU2 654 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 IRF2BP2Q7Z5L9 587 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 CDR2LQ86X02 465 aaPredicted RBP11.07□□□□□ -0.64
LINC00598-216ENST00000638163 C1orf127Q8N9H9 656 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 SMG8Q8ND04 991 aaKnown RBP11.07□□□□□ -0.64
LINC00598-216ENST00000638163 URGCPQ8TCY9 931 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 SEMA4DQ92854 862 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 WNT8BQ93098 351 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 TRIM11Q96F44 468 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 HPDLQ96IR7 371 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 ZNF830Q96NB3 372 aaPredicted RBP11.07□□□□□ -0.64
LINC00598-216ENST00000638163 ADAM2Q99965 735 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 MRPL9Q9BYD2 267 aaKnown RBP11.07□□□□□ -0.64
LINC00598-216ENST00000638163 BCO2Q9BYV7 579 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 XYLT2Q9H1B5 865 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 AGO3Q9H9G7 860 aaKnown RBP11.07□□□□□ -0.64
LINC00598-216ENST00000638163 RSAD1Q9HA92 442 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 TMEM161AQ9NX61 479 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 ARHGAP20Q9P2F6 1191 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 LCMT1Q9UIC8 334 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 ADGRG1Q9Y653 693 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 PTPRJQ12913 1337 aa11.07□□□□□ -0.64
LINC00598-216ENST00000638163 SMIM28A0A1B0GU29 152 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 ANO9A1A5B4 782 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 MYCP01106 439 aaPredicted RBP11.06□□□□□ -0.64
LINC00598-216ENST00000638163 CLTBP09497 229 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 EIF4A3P38919 411 aaKnown RBP11.06□□□□□ -0.64
LINC00598-216ENST00000638163 TAF6P49848 677 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 VAV2P52735 878 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 FAM189BP81408 668 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 KIF5AQ12840 1032 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 PTPN21Q16825 1174 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 ARHGAP44Q17R89 818 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 E4F1Q66K89 784 aaPredicted RBP11.06□□□□□ -0.64
LINC00598-216ENST00000638163 TRAF7Q6Q0C0 670 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 KIAA1328Q86T90 577 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 UNC93AQ86WB7 457 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 ECHDC2Q86YB7 292 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 MSANTD4Q8NCY6 345 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 GDAP2Q9NXN4 497 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
LINC00598-216ENST00000638163 PYCARDQ9ULZ3 195 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 CEP83Q9Y592 693 aa11.06□□□□□ -0.64
LINC00598-216ENST00000638163 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 C9IYK1 514 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 RNF225M0QZC1 329 aaPredicted RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 FOXN3O00409 490 aaPredicted RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 KIF5CO60282 957 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 LSM8O95777 96 aaKnown RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 MYBL1P10243 752 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 KRT5P13647 590 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 POLR2BP30876 1174 aaKnown RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 SNX16P57768 344 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 MYL6P60660 151 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 CDR2Q01850 454 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 INCA1Q0VD86 236 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 PTPN14Q15678 1187 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 NAB2Q15742 525 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 ASTE1Q2TB18 679 aaPredicted RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 WDR72Q3MJ13 1102 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 LMBRD2Q68DH5 695 aaPredicted RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 RAD9BQ6WBX8 426 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 ARHGEF19Q8IW93 802 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 TMEM192Q8IY95 271 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 RPUSD2Q8IZ73 545 aaKnown RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 TMEM86AQ8N2M4 240 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 RNF10Q8N5U6 811 aaKnown RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 KREMEN1Q96MU8 473 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 PPP1R10Q96QC0 940 aaKnown RBP11.05□□□□□ -0.64
LINC00598-216ENST00000638163 ZNF518BQ9C0D4 1074 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 GPR88Q9GZN0 384 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 MIS12Q9H081 205 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 SIX4Q9UIU6 781 aa11.05□□□□□ -0.64
LINC00598-216ENST00000638163 DSEQ9UL01 958 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms