RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 CYB561D2O14569 222 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 HOXD8P13378 290 aaPredicted RBP9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 PSMD6Q15008 389 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 ECHDC2Q86YB7 292 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 PAF1Q8N7H5 531 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 RNF39Q9H2S5 420 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 KDM4CQ9H3R0 1056 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 ENTPD7Q9NQZ7 604 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 LIMA1Q9UHB6 759 aaKnown RBP9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 CCP110O43303 1012 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 ADRB2P07550 413 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 CTNNB1P35222 781 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 RNASE9P60153 205 aaKnown RBP9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 GOLGA8FQ08AF8 430 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 GOLGA8DPQ0D2H9 430 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 FAM171A1Q5VUB5 890 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 CCAR2Q8N163 923 aaKnown RBP9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 MRFAP1L1Q96HT8 127 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 ZNF558Q96NG5 402 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 CERS4Q9HA82 394 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 PLEKHA5Q9HAU0 1116 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 PDLIM7Q9NR12 457 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 GRIN2DO15399 1336 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 A0A0U1RQF3 1178 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 SMIM28A0A1B0GU29 152 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 RFC2P35250 354 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 DLG4P78352 724 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 RBL2Q08999 1139 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 DRAP1Q14919 205 aaPredicted RBP9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 CCDC181Q5TID7 509 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 CCDC112Q8NEF3 446 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 GOLGA2P5Q9HBQ8 144 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 LRRC4Q9HBW1 653 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 TMEM161AQ9NX61 479 aa9.19□□□□□ -0.94
CACNA1A-254ENST00000637952 PODXLO00592 558 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ENPP3O14638 875 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ZSCAN12O43309 604 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 EOMESO95936 686 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 URODP06132 367 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 FERP16591 822 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ANXA13P27216 316 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 GNL1P36915 607 aaPredicted RBP9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 SPOPLQ6IQ16 392 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 DCUN1D2Q6PH85 259 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ELMSAN1Q6PJG2 1045 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 RNF34Q969K3 372 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 TNIP3Q96KP6 325 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 IL23AQ9NPF7 189 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ZNF446Q9NWS9 450 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 TTLL13PA6NNM8 815 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 LRRIQ3A6PVS8 624 aaPredicted RBP9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 I3L4J1 428 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 CAPN9O14815 690 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ABCB4P21439 1286 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 IGFBP4P22692 258 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ADORA2BP29275 332 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 CDCA2Q69YH5 1023 aaPredicted RBP9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 SLC9A9Q8IVB4 645 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 TMEM192Q8IY95 271 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 WNT8BQ93098 351 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 C18orf25Q96B23 403 aaPredicted RBP9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 FAM149B1Q96BN6 582 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 NFKBIZQ9BYH8 718 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 NIF3L1Q9GZT8 377 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 TMEM117Q9H0C3 514 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 PIDD1Q9HB75 910 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ARL5CA6NH57 179 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 TMEM110-MUSTN1A8MSY1 372 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 MED7O43513 233 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 PFKMP08237 780 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ODC1P11926 461 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 PCSK1P29120 753 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ADSSP30520 456 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ELAVL2Q12926 359 aaKnown RBP9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 LIN9Q5TKA1 542 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 CYP26C1Q6V0L0 522 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 EPM2AIP1Q7L775 607 aaPredicted RBP9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 NPAS4Q8IUM7 802 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 TRIM59Q8IWR1 403 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 OR5B17Q8NGF7 314 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 KCNN1Q92952 543 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 PPP1R9BQ96SB3 815 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 MYO1AQ9UBC5 1043 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 ITGA11Q9UKX5 1188 aa9.18□□□□□ -0.94
CACNA1A-254ENST00000637952 SSTR3P32745 418 aaPredicted RBP9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 GJC1P36383 396 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 KRT83P78385 493 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 KIF5AQ12840 1032 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 GRIK3Q13003 919 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 CCDC122Q5T0U0 273 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 NT5DC4Q86YG4 428 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 LRRC43Q8N309 656 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 TTC39CQ8N584 583 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 ZSWIM2Q8NEG5 633 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 CTNNBL1Q8WYA6 563 aaPredicted RBP9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 SLC35C1Q96A29 364 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 TMX1Q9H3N1 280 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 IMPACTQ9P2X3 320 aa9.17□□□□□ -0.94
CACNA1A-254ENST00000637952 APEX2Q9UBZ4 518 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms