RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 RFX7Q2KHR2 1363 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 PDZK1P1A8MUH7 402 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 DLGAP3O95886 979 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 AKT1P31749 480 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 ZNF200P98182 395 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 CATSPERBQ9H7T0 1116 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 ZNF302Q9NR11 478 aa18.88■□□□□ 0.61
CACNA1A-247ENST00000637769 TAB1Q15750 504 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 RPAP3Q9H6T3 665 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 HPS5Q9UPZ3 1129 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 IQCA1LA6NCM1 817 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 ITIH2P19823 946 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 FAM83BQ5T0W9 1011 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 CACHD1Q5VU97 1274 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 PADI6Q6TGC4 694 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 NSUN6Q8TEA1 469 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 QARSP47897 775 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 INPP5DQ92835 1189 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 ECSITQ9BQ95 431 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 NINQ8N4C6 2090 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 SERPINB3P29508 390 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 NPHS2Q9NP85 383 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 RBAKQ9NYW8 714 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 DOLKQ9UPQ8 538 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 hCG_2014768A0A024R1R8 64 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 ERVV-1B6SEH8 477 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 FAM47E-STBD1D6RA91 191 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 TTLL9Q3SXZ7 439 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 ANKRD40Q6AI12 368 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 ABCB11O95342 1321 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 SYNCRIPO60506 623 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 KRT17Q04695 432 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 CUL4AQ13619 759 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 FAM83EQ2M2I3 478 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 SRLQ86TD4 932 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 SLC10A4Q96EP9 437 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 ZNF341Q9BYN7 854 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 FAM49AQ9H0Q0 323 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 HSPBP1Q9NZL4 362 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 TRIM49P0CI25 452 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 TRIM49CP0CI26 452 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 PHKA1P46020 1223 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 AGBL2Q5U5Z8 902 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 GPR141Q7Z602 305 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 KCNV2Q8TDN2 545 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 OSCP1Q8WVF1 389 aa18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 C20orf96Q9NUD7 363 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-247ENST00000637769 CDC42BPAQ5VT25 1732 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 MAPK1P28482 360 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 NCAPHQ15003 741 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 C18orf8Q96DM3 657 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 RNPC3Q96LT9 517 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 OSBPL5Q9H0X9 879 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 LRRC24Q50LG9 513 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 CYP4Z1Q86W10 505 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 DNAJC9Q8WXX5 260 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 GDAQ9Y2T3 454 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 GFPT1Q06210 699 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 DOK7Q18PE1 504 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 TRPM8Q7Z2W7 1104 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 TRAPPC11Q7Z392 1133 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 ANKRD49Q8WVL7 239 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 THOC1Q96FV9 657 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 HEMGNQ9BXL5 484 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 OSBPL8Q9BZF1 889 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 ROPN1BQ9BZX4 212 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 ROPN1Q9HAT0 212 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 MRPS25P82663 173 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 OOSP2Q86WS3 158 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 MYLK2Q9H1R3 596 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 SLC38A7Q9NVC3 462 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 SLC16A3O15427 465 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 KCNJ6P48051 423 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 CCDC60Q8IWA6 550 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 FHDC1Q9C0D6 1143 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 LGR6Q9HBX8 967 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 GRID1Q9ULK0 1009 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 UBN2Q6ZU65 1347 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 RIN3Q8TB24 985 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 FAM167BQ9BTA0 163 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 IFNA14P01570 189 aa18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 STN1Q9H668 368 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-247ENST00000637769 CCDC149Q6ZUS6 474 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 CYFIP2Q96F07 1278 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 SDE2Q6IQ49 451 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 ARMC6Q6NXE6 501 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 GPD1LQ8N335 351 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 EXOSC4Q9NPD3 245 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 PNMA8CA0A1B0GUJ8 204 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 USP1O94782 785 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 ENO3P13929 434 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 DRAP1Q14919 205 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 SGSM1Q2NKQ1 1148 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 MTIF3Q9H2K0 278 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 ACADSBP45954 432 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 SNRPFP62306 86 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 SYCP2LQ5T4T6 812 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 RAD54LQ92698 747 aa18.85■□□□□ 0.61
CACNA1A-247ENST00000637769 ARL8AQ96BM9 186 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms