RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 PTPRHQ9HD43 1115 aa20.02■□□□□ 0.8
CLN5-219ENST00000637537 PCDHB4Q9Y5E5 795 aa20.02■□□□□ 0.8
CLN5-219ENST00000637537 RBM47A0AV96 593 aaKnown RBP20.02■□□□□ 0.79
CLN5-219ENST00000637537 DDX3YO15523 660 aaKnown RBP20.02■□□□□ 0.79
CLN5-219ENST00000637537 ITGA4P13612 1032 aa20.02■□□□□ 0.79
CLN5-219ENST00000637537 AADACL2Q6P093 401 aa20.02■□□□□ 0.79
CLN5-219ENST00000637537 MPZL3Q6UWV2 235 aa20.02■□□□□ 0.79
CLN5-219ENST00000637537 ADAT2Q7Z6V5 191 aaKnown RBP20.02■□□□□ 0.79
CLN5-219ENST00000637537 PASD1Q8IV76 773 aa20.02■□□□□ 0.79
CLN5-219ENST00000637537 ALG3Q92685 438 aa20.02■□□□□ 0.79
CLN5-219ENST00000637537 SELENOOQ9BVL4 669 aa20.02■□□□□ 0.79
CLN5-219ENST00000637537 NUP85Q9BW27 656 aa20.02■□□□□ 0.79
CLN5-219ENST00000637537 MGAMO43451 1857 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 GOLGA6CA6NDK9 693 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 CLTAP09496 248 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 GOLGA6DP0CG33 693 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 PROZP22891 400 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 MARCKSL1P49006 195 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 MYL6P60660 151 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 ACVR2BQ13705 512 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 TRADDQ15628 312 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 NAA35Q5VZE5 725 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 CNPY4Q8N129 248 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 ACTRT1Q8TDG2 376 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 GOLGA6AQ9NYA3 693 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 PGRMC1O00264 195 aaKnown RBP20.01■□□□□ 0.79
CLN5-219ENST00000637537 ZNF484Q5JVG2 852 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 ZNF467Q7Z7K2 595 aaPredicted RBP20.01■□□□□ 0.79
CLN5-219ENST00000637537 WDR49Q8IV35 697 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 KRT35Q92764 455 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 LENG1Q96BZ8 264 aaPredicted RBP20.01■□□□□ 0.79
CLN5-219ENST00000637537 CPB2Q96IY4 423 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLN5-219ENST00000637537 TMEM59LQ9UK28 342 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 PCDHB2Q9Y5E7 798 aa20.01■□□□□ 0.79
CLN5-219ENST00000637537 GRIN2DO15399 1336 aa20■□□□□ 0.79
CLN5-219ENST00000637537 IGF2BP3O00425 579 aaKnown RBP eCLIP20■□□□□ 0.79
CLN5-219ENST00000637537 CES2O00748 559 aa20■□□□□ 0.79
CLN5-219ENST00000637537 CXCL8P10145 99 aa20■□□□□ 0.79
CLN5-219ENST00000637537 MAP2K2P36507 400 aa20■□□□□ 0.79
CLN5-219ENST00000637537 CLEC16AQ2KHT3 1053 aa20■□□□□ 0.79
CLN5-219ENST00000637537 FBXW10Q5XX13 1052 aa20■□□□□ 0.79
CLN5-219ENST00000637537 ACAD10Q6JQN1 1059 aa20■□□□□ 0.79
CLN5-219ENST00000637537 ZNF564Q8TBZ8 553 aaPredicted RBP20■□□□□ 0.79
CLN5-219ENST00000637537 CYFIP2Q96F07 1278 aa20■□□□□ 0.79
CLN5-219ENST00000637537 NR2E1Q9Y466 385 aa20■□□□□ 0.79
CLN5-219ENST00000637537 GPR25O00155 361 aa20■□□□□ 0.79
CLN5-219ENST00000637537 EIF3HO15372 352 aaKnown RBP eCLIP20■□□□□ 0.79
CLN5-219ENST00000637537 RAD51CO43502 376 aa20■□□□□ 0.79
CLN5-219ENST00000637537 HEXIM1O94992 359 aaKnown RBP20■□□□□ 0.79
CLN5-219ENST00000637537 FGGP02679 453 aa20■□□□□ 0.79
CLN5-219ENST00000637537 HOXC6P09630 235 aa20■□□□□ 0.79
CLN5-219ENST00000637537 CD58P19256 250 aa20■□□□□ 0.79
CLN5-219ENST00000637537 MNAT1P51948 309 aa20■□□□□ 0.79
CLN5-219ENST00000637537 GUCY2DQ02846 1103 aa20■□□□□ 0.79
CLN5-219ENST00000637537 DUSP28Q4G0W2 176 aa20■□□□□ 0.79
CLN5-219ENST00000637537 ZNF394Q53GI3 561 aa20■□□□□ 0.79
CLN5-219ENST00000637537 OR6J1Q8NGC5 347 aa20■□□□□ 0.79
CLN5-219ENST00000637537 CAPS2Q9BXY5 557 aa20■□□□□ 0.79
CLN5-219ENST00000637537 DDX47Q9H0S4 455 aaKnown RBP20■□□□□ 0.79
CLN5-219ENST00000637537 CDT1Q9H211 546 aa20■□□□□ 0.79
CLN5-219ENST00000637537 KRIT1O00522 736 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 MMP3P08254 477 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 UNGP13051 313 aaPredicted RBP19.99■□□□□ 0.79
CLN5-219ENST00000637537 COMTP21964 271 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 EMID1Q96A84 441 aaPredicted RBP19.99■□□□□ 0.79
CLN5-219ENST00000637537 TRIM7Q9C029 511 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 ABHD16BQ9H3Z7 469 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 EPB41L5Q9HCM4 733 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 CNOT8Q9UFF9 292 aaKnown RBP19.99■□□□□ 0.79
CLN5-219ENST00000637537 KAT6AQ92794 2004 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 MTHFD1LQ6UB35 978 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 RPAINQ86UA6 219 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 BCAS4Q8TDM0 211 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 SH3GL2Q99962 352 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 IMPG2Q9BZV3 1241 aa19.99■□□□□ 0.79
CLN5-219ENST00000637537 ATXN2Q99700 1313 aaKnown RBP19.98■□□□□ 0.79
CLN5-219ENST00000637537 ASS1P00966 412 aaKnown RBP19.98■□□□□ 0.79
CLN5-219ENST00000637537 GNA15P30679 374 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 MAPK4P31152 587 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 HADHBP55084 474 aaKnown RBP19.98■□□□□ 0.79
CLN5-219ENST00000637537 TMEM62Q0P6H9 643 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 DUOXA2Q1HG44 320 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 SCARA5Q6ZMJ2 495 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 RASGEF1CQ8N431 466 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 RBBP8NLQ8NC74 664 aaPredicted RBP19.98■□□□□ 0.79
CLN5-219ENST00000637537 DONSONQ9NYP3 566 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 GTF3C4Q9UKN8 822 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 GINS2Q9Y248 185 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 ASAP2O43150 1006 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 CYP1A2P05177 515 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 FGFR4P22455 802 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 PHKA2P46019 1235 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 CARSP49589 748 aaKnown RBP19.98■□□□□ 0.79
CLN5-219ENST00000637537 ZNF157P51786 506 aaPredicted RBP19.98■□□□□ 0.79
CLN5-219ENST00000637537 MARCH8Q5T0T0 291 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 LINC01465Q8N7H1 131 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 NLRP7Q8WX94 980 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 IFT81Q8WYA0 676 aa19.98■□□□□ 0.79
CLN5-219ENST00000637537 FAM81BQ96LP2 452 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms