RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 FAXDC2Q96IV6 333 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 CPB2Q96IY4 423 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 ZNF668Q96K58 619 aaPredicted RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 SNX27Q96L92 541 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 UROC1Q96N76 676 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 ACAP3Q96P50 834 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 RPS6KC1Q96S38 1066 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 GDF15Q99988 308 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 CBWD1Q9BRT8 395 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 TMEM117Q9H0C3 514 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 DNAJC25Q9H1X3 360 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 SEMA6BQ9H3T3 888 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 FAM124BQ9H5Z6 455 aaPredicted RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 RPF1Q9H9Y2 349 aaKnown RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 RSAD1Q9HA92 442 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 POLD4Q9HCU8 107 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 RBAKQ9NYW8 714 aaPredicted RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 MAGEC2Q9UBF1 373 aaPredicted RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 RWDD3Q9Y3V2 267 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 NFE2L3Q9Y4A8 694 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 DAAM1Q9Y4D1 1078 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 PCDHB2Q9Y5E7 798 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 GBF1Q92538 1859 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 PDE4DIPQ5VU43 2346 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 KIAA1671Q9BY89 1806 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 ARHGEF37A1IGU5 675 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 GTPBP10A4D1E9 387 aaKnown RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 ANKRD63C9JTQ0 380 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 ENPP3O14638 875 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 CSDE1O75534 798 aaKnown RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 RECQL4O94761 1208 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 ATF7P17544 494 aaPredicted RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 FGFR4P22455 802 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 MLLT1Q03111 559 aaPredicted RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 SRSF11Q05519 484 aaKnown RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 CYP24A1Q07973 514 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 CDKAL1Q5VV42 579 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 ALKAL1Q6UXT8 129 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 C11orf57Q6ZUT1 292 aaPredicted RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 FAM186BQ8IYM0 893 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 ABI1Q8IZP0 508 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 LRRC43Q8N309 656 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 SMG8Q8ND04 991 aaKnown RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 LINC01599Q8WXQ3 324 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 VWCEQ96DN2 955 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 MFSD14AQ96MC6 490 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 FNBP1Q96RU3 617 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 CGRRF1Q99675 332 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 DUSP9Q99956 384 aaKnown RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 EIF2AQ9BY44 585 aaKnown RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 NXF3Q9H4D5 531 aaKnown RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 RC3H2Q9HBD1 1191 aaKnown RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 ARMCX3Q9UH62 379 aaPredicted RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 LRFN2Q9ULH4 789 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 UBQLN1Q9UMX0 589 aaKnown RBP7.28□□□□□ -1.24
UPF3B-205ENST00000636792 MAPK8IP1Q9UQF2 711 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 PCDHB7Q9Y5E2 793 aa7.28□□□□□ -1.24
UPF3B-205ENST00000636792 TRIM49BA6NDI0 452 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 TMEM189-UBE2V1I3L0A0 370 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 AKAP3O75969 853 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 GJB5O95377 273 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 STAU1O95793 577 aaKnown RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 TPM3P06753 285 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 ZNF18P17022 549 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 PNPLA4P41247 253 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 MAGEA10P43363 369 aaPredicted RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 CYP2J2P51589 502 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 VAMP7P51809 220 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 PMS1P54277 932 aaKnown RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 HTRA4P83105 476 aaPredicted RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 CETN1Q12798 172 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 IQCB1Q15051 598 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 ENOX2Q16206 610 aaKnown RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 MAN2A1Q16706 1144 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 CCDC40Q4G0X9 1142 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 CEP135Q66GS9 1140 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 ISM2Q6H9L7 571 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 LYPD4Q6UWN0 246 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 CRELD2Q6UXH1 353 aaPredicted RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 ZNF365Q70YC5 407 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 TRIM59Q8IWR1 403 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 THNSL1Q8IYQ7 743 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 AOPEPQ8N6M6 819 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 BEST2Q8NFU1 509 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 PARD3BQ8TEW8 1205 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 CACTINQ8WUQ7 758 aaKnown RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 ZNF689Q96CS4 500 aaPredicted RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 IQCDQ96DY2 449 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 BORCS6Q96GS4 357 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 ANKRD36BP1Q96IX9 119 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 CNOT6LQ96LI5 555 aaKnown RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 FAM81BQ96LP2 452 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 SAMD11Q96NU1 681 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 FAM213AQ9BRX8 229 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 TMEM175Q9BSA9 504 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 HAPLN2Q9GZV7 340 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 POLMQ9NP87 494 aaPredicted RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 ITGA11Q9UKX5 1188 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms