RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 USP10Q14694 798 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 SLC39A14Q15043 492 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 MED8Q96G25 268 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 TGS1Q96RS0 853 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 PARVBQ9HBI1 364 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 ATMINO43313 823 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 MIB1Q86YT6 1006 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 STAG2Q8N3U4 1231 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 DTX3LQ8TDB6 740 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 A0A087X0T9 212 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 PRPF3O43395 683 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 EGFRP00533 1210 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 ARHGEF25Q86VW2 580 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 SSH3Q8TE77 659 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 CINPQ9BW66 212 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 CUEDC2Q9H467 287 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 UTP6Q9NYH9 597 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 ATP1A3P13637 1013 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 IER5Q5VY09 327 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 BNIPLQ7Z465 357 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 LUZP2Q86TE4 346 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 KRT78Q8N1N4 520 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 CERKQ8TCT0 537 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 VPS50Q96JG6 964 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 CCDC151A5D8V7 595 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 ASS1P00966 412 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 YWHAZP63104 245 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 CCDC3Q9BQI4 270 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 MOXD2PA6NHM9 499 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 ASB14A6NK59 587 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 ZBTB39O15060 712 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 KRT38O76015 456 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 PGK2P07205 417 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 ABCB1P08183 1280 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 GUCY1A2P33402 732 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 SERPINB4P48594 390 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 ALDH9A1P49189 494 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 CSNK2BP67870 215 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 LDHDQ86WU2 507 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 BLOC1S5Q8TDH9 187 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 SGF29Q96ES7 293 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 PCMTD2Q9NV79 361 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 RPS6KB2Q9UBS0 482 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 ZNF711Q9Y462 761 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 MRPS15P82914 257 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 EPC2Q52LR7 807 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 TBC1D10CQ8IV04 446 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 MCPH1Q8NEM0 835 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 MS4A14Q96JA4 679 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 SLC24A3Q9HC58 644 aa18.72■□□□□ 0.59
CACNA1A-227ENST00000636549 FAM47E-STBD1D6RA91 191 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 PRCPP42785 496 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 IRAK1BP1Q5VVH5 260 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 SENP2Q9HC62 589 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 CRLS1Q9UJA2 301 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 MAST1Q9Y2H9 1570 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 SCAMP3O14828 347 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 CKBP12277 381 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 AP1ARQ63HQ0 302 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 OTOAQ7RTW8 1153 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 STN1Q9H668 368 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 C6orf118Q5T5N4 469 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 PLD3Q8IV08 490 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 ABCB6Q9NP58 842 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 CPSF4O95639 269 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 KRT4P19013 534 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 PTPN7P35236 360 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 ALS2CLQ60I27 953 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 YIPF3Q9GZM5 350 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 ASCC2Q9H1I8 757 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 RHBGQ9H310 441 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 COPS7BQ9H9Q2 264 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 NBPF26B4DH59 902 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 QRICH1Q2TAL8 776 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 ZNF555Q8NEP9 628 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 ZKSCAN4Q969J2 545 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 MAGEF1Q9HAY2 307 aa18.71■□□□□ 0.59
CACNA1A-227ENST00000636549 KRT8P05787 483 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 GSTM1P09488 218 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 RALBP11234 206 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 ABCD1P33897 745 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 GPC1P35052 558 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 PMS2P54278 862 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 DUOXA2Q1HG44 320 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 EXD1Q8NHP7 514 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 ZNF560Q96MR9 790 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 YY1AP1Q9H869 796 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 NUP153P49790 1475 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 CIAO1O76071 339 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 MAPRE1Q15691 268 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 TDRD10Q5VZ19 366 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 TRIM62Q9BVG3 475 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 FBXO2Q9UK22 296 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 SLC9A8Q9Y2E8 581 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 TARSL2A2RTX5 802 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 RHOBTB1O94844 696 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 VTNP04004 478 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 FNTAP49354 379 aa18.7■□□□□ 0.58
CACNA1A-227ENST00000636549 STARD3Q14849 445 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms