RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 LONP1P36776 959 aaKnown RBP8.11□□□□□ -1.11
CIITA-214ENST00000636238 PRPHP41219 470 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 CXCL12P48061 93 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 MBTD1Q05BQ5 628 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 SPEM2Q0P670 501 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 ORC2Q13416 577 aaPredicted RBP8.11□□□□□ -1.11
CIITA-214ENST00000636238 SIM2Q14190 667 aaPredicted RBP8.11□□□□□ -1.11
CIITA-214ENST00000636238 ZRSR1Q15695 479 aaKnown RBP8.11□□□□□ -1.11
CIITA-214ENST00000636238 AMHR2Q16671 573 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 ANKS3Q6ZW76 656 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 GRAMD1CQ8IYS0 662 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 ITFG1Q8TB96 612 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 SLC7A14Q8TBB6 771 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 HAS1Q92839 578 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 TMEM143Q96AN5 459 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 DHX58Q96C10 678 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 UROC1Q96N76 676 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 PLIN2Q99541 437 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 MTRQ99707 1265 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 KXD1Q9BQD3 176 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 TRMT61BQ9BVS5 477 aaKnown RBP8.11□□□□□ -1.11
CIITA-214ENST00000636238 EIF2AQ9BY44 585 aaKnown RBP8.11□□□□□ -1.11
CIITA-214ENST00000636238 GPR88Q9GZN0 384 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 RBSNQ9H1K0 784 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 RNF39Q9H2S5 420 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 C8orf33Q9H7E9 229 aaPredicted RBP8.11□□□□□ -1.11
CIITA-214ENST00000636238 ZFP14Q9HCL3 533 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 MTRRQ9UBK8 725 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 VAV3Q9UKW4 847 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 CACNA1IQ9P0X4 2223 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 MYH11P35749 1972 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 TMEM150BA6NC51 233 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 SHISA7A6NL88 538 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 INO80B-WBP1J3KQ70 363 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 CCL16O15467 120 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 ACTN4O43707 911 aaKnown RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 THP07101 528 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 PROS1P07225 676 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 PRR29P0C7W0 189 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 XRCC6P12956 609 aaKnown RBP eCLIP8.1□□□□□ -1.11
CIITA-214ENST00000636238 PTPN2P17706 415 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 PSMC3P17980 439 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 ARF4P18085 180 aaPredicted RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 NPEPPSP55786 919 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 PNOCQ13519 176 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 KARSQ15046 597 aaKnown RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 FAM187BQ17R55 369 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 DGKKQ5KSL6 1271 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 FAM171A1Q5VUB5 890 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 PLA2G4FQ68DD2 849 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 SLC8B1Q6J4K2 584 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 PRSS55Q6UWB4 352 aaPredicted RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 KRBA2Q6ZNG9 492 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 RBM43Q6ZSC3 357 aaKnown RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 APBB1IPQ7Z5R6 666 aaPredicted RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 MAP4K3Q8IVH8 894 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 SLFN12Q8IYM2 578 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 FAM3CQ92520 227 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 TIGD1Q96MW7 591 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 LXNQ9BS40 222 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 FUCA2Q9BTY2 467 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 NXF3Q9H4D5 531 aaKnown RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 BRD9Q9H8M2 597 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 ANKEF1Q9NU02 776 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 PRMT7Q9NVM4 692 aaPredicted RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 MIOSQ9NXC5 875 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 DNMT3BQ9UBC3 853 aaKnown RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 POLIQ9UNA4 740 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 PCDHGA5Q9Y5G8 931 aa8.1□□□□□ -1.11
CIITA-214ENST00000636238 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.1□□□□□ -1.11
CIITA-214ENST00000636238 F8W810 466 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 BIN1O00499 593 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 TM4SF5O14894 197 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 N4BP3O15049 544 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 LRG1P02750 347 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 RHOP08100 348 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 ZNF806P0C7X5 589 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 RPL17P18621 184 aaKnown RBP8.09□□□□□ -1.11
CIITA-214ENST00000636238 CD72P21854 359 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 FCARP24071 287 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 CASP1P29466 404 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 DEKP35659 375 aaKnown RBP8.09□□□□□ -1.11
CIITA-214ENST00000636238 ARL2P36404 184 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 UBA7P41226 1012 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 AFMP43652 599 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 FXR2P51116 673 aaKnown RBP eCLIP8.09□□□□□ -1.11
CIITA-214ENST00000636238 NTHL1P78549 312 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 TYRO3Q06418 890 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 XKR9Q5GH70 373 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 TPGS2Q68CL5 300 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 ISM2Q6H9L7 571 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 TSSK4Q6SA08 328 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 SASS6Q6UVJ0 657 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 WDR5BQ86VZ2 330 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 TCEAL8Q8IYN2 117 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 RNF214Q8ND24 703 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 RASSF8Q8NHQ8 419 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms