RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 MYL5Q02045 173 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 KCNH2Q12809 1159 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 TUSC3Q13454 348 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 KRT31Q15323 416 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 TPD52L1Q16890 204 aaPredicted RBP9.21□□□□□ -0.94
CDKL5-209ENST00000635828 TCP11X2Q5H9J9 407 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 RTP2Q5QGT7 225 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 PRSS55Q6UWB4 352 aaPredicted RBP9.21□□□□□ -0.94
CDKL5-209ENST00000635828 SCARA5Q6ZMJ2 495 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 TRIM59Q8IWR1 403 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 TMEM209Q96SK2 561 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 ARMCX3Q9UH62 379 aaPredicted RBP9.21□□□□□ -0.94
CDKL5-209ENST00000635828 PCDHA11Q9Y5I1 949 aa9.21□□□□□ -0.94
CDKL5-209ENST00000635828 BICDL2A1A5D9 508 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 INPPL1O15357 1258 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 PNMA6AP0CW24 399 aaPredicted RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 TKTP29401 623 aaKnown RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 ALDH7A1P49419 539 aaKnown RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 FXR1P51114 621 aaKnown RBP eCLIP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 BIRC3Q13489 604 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 NFIL3Q16649 462 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 FILIP1Q7Z7B0 1213 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 RBM23Q86U06 439 aaKnown RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 CMTR2Q8IYT2 770 aaKnown RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 URGCPQ8TCY9 931 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 TATDN2Q93075 761 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 FAM193BQ96PV7 902 aaPredicted RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 MTIF3Q9H2K0 278 aaKnown RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 VPS13AQ96RL7 3174 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 EPHB6O15197 1021 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 ADAM12O43184 909 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 TMEM191BP0C7N4 346 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 EPB41P11171 864 aaKnown RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 SLC9A1P19634 815 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 LILRA4P59901 499 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 ZNF445P59923 1031 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 CLDN10P78369 228 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 C15orf39Q6ZRI6 1047 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 ADGRD2Q7Z7M1 963 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 GOLGA5Q8TBA6 731 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 CGRRF1Q99675 332 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 XYLT2Q9H1B5 865 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 HMGXB4Q9UGU5 601 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 FAN1Q9Y2M0 1017 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 PES1O00541 588 aaKnown RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 PIRO00625 290 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 KIF20AO95235 890 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 ALDH2P05091 517 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 OR4Q2P0C623 313 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 RPL13P26373 211 aaKnown RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 BMPR1AP36894 532 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 SLC39A11Q8N1S5 342 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 TMEM174Q8WUU8 243 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 IGSF21Q96ID5 467 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 TUBGCP2Q9BSJ2 902 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 SDCBP2Q9H190 292 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 ASB7Q9H672 318 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 PLEKHA5Q9HAU0 1116 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 ACP6Q9NPH0 428 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 NXF1Q9UBU9 619 aaKnown RBP9.2□□□□□ -0.94
CDKL5-209ENST00000635828 TSC2P49815 1807 aa9.2□□□□□ -0.94
CDKL5-209ENST00000635828 ANO9A1A5B4 782 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 CLSTN1O94985 981 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 ABCD1P33897 745 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 WDR49Q8IV35 697 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 POF1BQ8WVV4 589 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 CDH22Q9UJ99 828 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 NUB1Q9Y5A7 615 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 SPATA31D3P0C874 917 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 PTMSP20962 102 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 CA8P35219 290 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 HSP90AA2PQ14568 343 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-209ENST00000635828 DUOXA2Q1HG44 320 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 ZACNQ401N2 412 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 KIAA0319Q5VV43 1072 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 SPATA31D4Q6ZUB0 917 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 STKLD1Q8NE28 680 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 LMO3Q8TAP4 145 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 SPPL3Q8TCT6 385 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 SMYD3Q9H7B4 428 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 ADAM28Q9UKQ2 775 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 C2CD2Q9Y426 696 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 WEE2P0C1S8 567 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 SCP2P22307 547 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 ACAT1P24752 427 aaKnown RBP9.19□□□□□ -0.94
CDKL5-209ENST00000635828 LMO2P25791 158 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 SSTR3P32745 418 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-209ENST00000635828 MTIF2P46199 727 aaKnown RBP9.19□□□□□ -0.94
CDKL5-209ENST00000635828 FMO5P49326 533 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 SMAD3P84022 425 aaKnown RBP9.19□□□□□ -0.94
CDKL5-209ENST00000635828 KCNMA1Q12791 1236 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 WDR72Q3MJ13 1102 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 FAM171A1Q5VUB5 890 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 INTS8Q75QN2 995 aaKnown RBP9.19□□□□□ -0.94
CDKL5-209ENST00000635828 RRAGAQ7L523 313 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 ARHGEF19Q8IW93 802 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 HACE1Q8IYU2 909 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 UBN1Q9NPG3 1134 aa9.19□□□□□ -0.94
CDKL5-209ENST00000635828 MSRAQ9UJ68 235 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms