RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 HPDP32754 393 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 TMEM132BQ14DG7 1078 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 BOLA3Q53S33 107 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 C18orf8Q96DM3 657 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 RSAD1Q9HA92 442 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 DONSONQ9NYP3 566 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 PCDHAC2Q9Y5I4 1007 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 E7EVH7 732 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ATG7O95352 703 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 VDRP11473 427 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ARL4CP56559 192 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 NAA35Q5VZE5 725 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ZIM3Q96PE6 472 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 FAM96AQ9H5X1 160 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 TMEM59LQ9UK28 342 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ITGA11Q9UKX5 1188 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 AKT3Q9Y243 479 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 SNX24Q9Y343 169 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ACTL7BQ9Y614 415 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 A0A0B4J269 797 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ZMYND10O75800 440 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 SASH3O75995 380 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ILF2Q12905 390 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 PRKG1Q13976 671 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 DAW1Q8N136 415 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 CCDC197Q8NCU1 140 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 OTUD5Q96G74 571 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 SH3GL2Q99962 352 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 PLEKHA5Q9HAU0 1116 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 TMBIM4Q9HC24 238 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 KLHL14Q9P2G3 628 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 A0A1B0GUL6 1792 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 TCHHQ07283 1943 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 DAPK3O43293 454 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 SUN1O94901 812 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 CCNE2O96020 404 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 KRT3P12035 628 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF135P52742 658 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 HNRNPH2P55795 449 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 EAPPQ56P03 285 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 DEFB132Q7Z7B7 95 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 IQCKQ8N0W5 287 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 FNIP1Q8TF40 1166 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 CASKIN2Q8WXE0 1202 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 GDAP1L1Q96MZ0 367 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 PACSIN1Q9BY11 444 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 NFKBIZQ9BYH8 718 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 EPN3Q9H201 632 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 LRRC37AA6NMS7 1700 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ECM2O94769 699 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 UBA1P22314 1058 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 STX2P32856 288 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ARL2P36404 184 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 TNIP3Q96KP6 325 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 OSBPL8Q9BZF1 889 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 DRG1Q9Y295 367 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 LRRD1A4D1F6 860 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 NFKBIEO00221 500 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 PRPSAP2O60256 369 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 FAM107AO95990 144 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 FAM163BP0C2L3 166 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 MCCD1P59942 119 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 SKIDA1Q1XH10 827 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 TTC31Q49AM3 519 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 CDKL3Q8IVW4 592 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 CCDC60Q8IWA6 550 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 AFG1LQ8WV93 481 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 ACAP3Q96P50 834 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 FIZ1Q96SL8 496 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 TARS2Q9BW92 718 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 UBQLN1Q9UMX0 589 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 NOVA2Q9UNW9 492 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 RRP15Q9Y3B9 282 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 TTI1O43156 1089 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 HNRNPCL1O60812 293 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 MAGEA9P43362 315 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 YTHDF3Q7Z739 585 aaKnown RBP4.83□□□□□ -1.64
SCN1A-210ENST00000635776 IL31RAQ8NI17 732 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 NLRP7Q8WX94 980 aa4.83□□□□□ -1.64
SCN1A-210ENST00000635776 PDE2AO00408 941 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 EDIL3O43854 480 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 SORBS3O60504 671 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PPFIA2O75334 1257 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 SGPL1O95470 568 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 SRGAP2CP0DJJ0 459 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PSMA2P25787 234 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 HSD17B3P37058 310 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 IRAK1P51617 712 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF467Q7Z7K2 595 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ARHGEF19Q8IW93 802 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 LRRN4CLQ8ND94 238 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PRPF31Q8WWY3 499 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 TMEM143Q96AN5 459 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 TSNARE1Q96NA8 513 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 GLIS2Q9BZE0 524 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ATXN2Q99700 1313 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 A6NJR5 290 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ATP5HO75947 161 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 HMGCRP04035 888 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 GLRA2P23416 452 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms