RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 BEST2Q8NFU1 509 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 TSPAN18Q96SJ8 248 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 MFSD1Q9H3U5 465 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 RXFP1Q9HBX9 757 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 SLC39A2Q9NP94 309 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 CNTN3Q9P232 1028 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 R3HCC1Q9Y3T6 440 aaKnown RBP16.06■□□□□ 0.16
HSPG2-214ENST00000635682 PTPRZ1P23471 2315 aaPredicted RBP16.06■□□□□ 0.16
HSPG2-214ENST00000635682 USP34Q70CQ2 3546 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 DOCK6Q96HP0 2047 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 MTCL1Q9Y4B5 1905 aaKnown RBP16.06■□□□□ 0.16
HSPG2-214ENST00000635682 FAM237AA0A1B0GTK4 181 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 ANKRD63C9JTQ0 380 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 ABLIM1O14639 778 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 GALR2O43603 387 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-214ENST00000635682 N4BP1O75113 896 aaKnown RBP16.05■□□□□ 0.16
HSPG2-214ENST00000635682 PPP1R37O75864 691 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 B3GAT3O94766 335 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 SMC2O95347 1197 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 RPN1P04843 607 aaKnown RBP16.05■□□□□ 0.16
HSPG2-214ENST00000635682 KCNE1P15382 129 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 RPL17P18621 184 aaKnown RBP16.05■□□□□ 0.16
HSPG2-214ENST00000635682 CASP5P51878 434 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 USP41Q3LFD5 358 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 FUT10Q6P4F1 479 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 C15orf39Q6ZRI6 1047 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 NELFCDQ8IXH7 590 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 FLCNQ8NFG4 579 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 RIN2Q8WYP3 895 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-214ENST00000635682 PPP1R10Q96QC0 940 aaKnown RBP16.05■□□□□ 0.16
HSPG2-214ENST00000635682 PAAF1Q9BRP4 392 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 GOLPH3LQ9H4A5 285 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 KCNK12Q9HB15 430 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 CHST7Q9NS84 486 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 RMND1Q9NWS8 449 aa16.05■□□□□ 0.16
HSPG2-214ENST00000635682 UBQLN1Q9UMX0 589 aaKnown RBP16.05■□□□□ 0.16
HSPG2-214ENST00000635682 TCHHQ07283 1943 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 IL18RAPO95256 599 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 GBP2P32456 591 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-214ENST00000635682 RPL9P32969 192 aaKnown RBP16.04■□□□□ 0.16
HSPG2-214ENST00000635682 TNFSF9P41273 254 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 ACOT2P49753 483 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 SNRPFP62306 86 aaKnown RBP16.04■□□□□ 0.16
HSPG2-214ENST00000635682 TDGQ13569 410 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 KMT5BQ4FZB7 885 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 ASTLQ6HA08 431 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-214ENST00000635682 PDXDC1Q6P996 788 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 DCLRE1AQ6PJP8 1040 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 CEP57Q86XR8 500 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 CMASQ8NFW8 434 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-214ENST00000635682 GOLGA5Q8TBA6 731 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 HASPINQ8TF76 798 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 RSAD2Q8WXG1 361 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 SMG7Q92540 1137 aaKnown RBP16.04■□□□□ 0.16
HSPG2-214ENST00000635682 HPS3Q969F9 1004 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 IPO9Q96P70 1041 aaKnown RBP16.04■□□□□ 0.16
HSPG2-214ENST00000635682 FAM213AQ9BRX8 229 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 CXCL16Q9H2A7 254 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 KIAA1586Q9HCI6 787 aa16.04■□□□□ 0.16
HSPG2-214ENST00000635682 CGNQ9P2M7 1197 aaKnown RBP16.04■□□□□ 0.16
HSPG2-214ENST00000635682 DOCK8Q8NF50 2099 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 LACTBL1A8MY62 500 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 PODXLO00592 558 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 TGM5O43548 720 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 NARSO43776 548 aaKnown RBP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 GFRA3O60609 400 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 MCM4P33991 863 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 POU5F1Q01860 360 aaKnown RBP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 KCNA1Q09470 495 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 TMEM132DQ14C87 1099 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 SLC10A6Q3KNW5 377 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 SLC39A4Q6P5W5 647 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 PRSS55Q6UWB4 352 aaPredicted RBP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 GPD1LQ8N335 351 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 CACTINQ8WUQ7 758 aaKnown RBP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 ZNF707Q96C28 371 aaPredicted RBP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 SAAL1Q96ER3 474 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 GBP4Q96PP9 640 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 STRA6Q9BX79 667 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 GTPBP4Q9BZE4 634 aaKnown RBP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 PCIF1Q9H4Z3 704 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 ASB7Q9H672 318 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 WDR6Q9NNW5 1121 aaKnown RBP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 RBAKQ9NYW8 714 aaPredicted RBP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 DPP7Q9UHL4 492 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 CPSF3Q9UKF6 684 aaKnown RBP16.03■□□□□ 0.16
HSPG2-214ENST00000635682 FBXL21Q9UKT6 434 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 STYXL1Q9Y6J8 313 aa16.03■□□□□ 0.16
HSPG2-214ENST00000635682 CLUHO75153 1309 aa16.02■□□□□ 0.16
HSPG2-214ENST00000635682 RIF1Q5UIP0 2472 aaKnown RBP16.02■□□□□ 0.16
HSPG2-214ENST00000635682 TISP43B9A030 160 aa16.02■□□□□ 0.16
HSPG2-214ENST00000635682 GOLGA6L22H0YM25 854 aa16.02■□□□□ 0.16
HSPG2-214ENST00000635682 PI15O43692 258 aa16.02■□□□□ 0.16
HSPG2-214ENST00000635682 EXTL3O43909 919 aa16.02■□□□□ 0.16
HSPG2-214ENST00000635682 KIF4AO95239 1232 aa16.02■□□□□ 0.16
HSPG2-214ENST00000635682 CLCNKBP51801 687 aa16.02■□□□□ 0.16
HSPG2-214ENST00000635682 NUBP1P53384 320 aa16.02■□□□□ 0.16
HSPG2-214ENST00000635682 SURF1Q15526 300 aa16.02■□□□□ 0.16
HSPG2-214ENST00000635682 ENOX2Q16206 610 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms