RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 DDX27Q96GQ7 796 aaKnown RBP16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 SPATA32Q96LK8 384 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 DRC1Q96MC2 740 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 UROC1Q96N76 676 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 DDX23Q9BUQ8 820 aaKnown RBP16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 CCDC94Q9BW85 323 aaPredicted RBP16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 KCND2Q9NZV8 630 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 STK17AQ9UEE5 414 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 BACE2Q9Y5Z0 518 aa16.99■□□□□ 0.31
SNRNP48-203ENST00000634363 EP300Q09472 2414 aaPredicted RBP16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 HIP1RO75146 1068 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 GUCY2CP25092 1073 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 STAT6P42226 847 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 PEX3P56589 373 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 SOX4Q06945 474 aaPredicted RBP16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 DHX8Q14562 1220 aaKnown RBP16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 SLC5A9Q2M3M2 681 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 C1orf186Q6ZWK4 172 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 GPBP1Q86WP2 473 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 ZNF461Q8TAF7 563 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 CORO1BQ9BR76 489 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 TCHPQ9BT92 498 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 LTB4R2Q9NPC1 389 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 HEBP1Q9NRV9 189 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 TOPORSQ9NS56 1045 aaPredicted RBP16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 RCOR1Q9UKL0 485 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 TNFSF13BQ9Y275 285 aa16.98■□□□□ 0.31
SNRNP48-203ENST00000634363 GVINP1Q7Z2Y8 2422 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 NCAM2O15394 837 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 KRT18P05783 430 aaKnown RBP16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 POU2F2P09086 479 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 DDIT3P35638 169 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 ROR1Q01973 937 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 RAD51AP2Q09MP3 1159 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 DMP1Q13316 513 aaPredicted RBP16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 MCM6Q14566 821 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 ZNF568Q3ZCX4 644 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 VARS2Q5ST30 1063 aaKnown RBP16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 TANGO2Q6ICL3 276 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 RTL10Q7L3V2 364 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 SUMF1Q8NBK3 374 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 ACO2Q99798 780 aaKnown RBP16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 OSBPL6Q9BZF3 934 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 SCAND2PQ9GZW5 306 aaPredicted RBP16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 CYP4F11Q9HBI6 524 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 BLOC1S4Q9NUP1 217 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 GDE1Q9NZC3 331 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 NCDNQ9UBB6 729 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 FBXO4Q9UKT5 387 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 NUB1Q9Y5A7 615 aa16.97■□□□□ 0.31
SNRNP48-203ENST00000634363 PATJQ8NI35 1801 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 MED19A0JLT2 244 aaPredicted RBP16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 WDR27A2RRH5 827 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 PODXLO00592 558 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 ECI2O75521 394 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 HARSP12081 509 aaKnown RBP16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 CEBPBP17676 345 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 TARSP26639 723 aaKnown RBP16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 GRM5P41594 1212 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 GRM2Q14416 872 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 PUM1Q14671 1186 aaKnown RBP eCLIP16.96■□□□□ 0.317e-6■□□□□ 10.1
SNRNP48-203ENST00000634363 POTEHQ6S545 545 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 TSSK4Q6SA08 328 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 ZNF852Q6ZMS4 543 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 PDILTQ8N807 584 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 LRRC15Q8TF66 581 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 LEO1Q8WVC0 666 aaPredicted RBP16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 ACAP3Q96P50 834 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 NELL2Q99435 816 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 TARS2Q9BW92 718 aaKnown RBP16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 CDT1Q9H211 546 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 C17orf75Q9HAS0 396 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 SLC38A7Q9NVC3 462 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 FAM13BQ9NYF5 915 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 CIZ1Q9ULV3 898 aaPredicted RBP16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 PCDHA7Q9UN72 937 aa16.96■□□□□ 0.31
SNRNP48-203ENST00000634363 ABLIM3O94929 683 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 NPTX2P47972 431 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 ZNF528Q3MIS6 628 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 SLC8B1Q6J4K2 584 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 SHC4Q6S5L8 630 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 ALKAL1Q6UXT8 129 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 TCEAL4Q96EI5 215 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 CHAMP1Q96JM3 812 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 ZMAT2Q96NC0 199 aaKnown RBP16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 MRPL4Q9BYD3 311 aaKnown RBP16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 PANK2Q9BZ23 570 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 KMT5AQ9NQR1 393 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 KCNG1Q9UIX4 513 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 ODF2LQ9ULJ1 636 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 NDRG2Q9UN36 371 aaKnown RBP16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 MRPS17Q9Y2R5 130 aaKnown RBP16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 CITO14578 2027 aa16.95■□□□□ 0.3
SNRNP48-203ENST00000634363 ARHGEF37A1IGU5 675 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 SFI1A8K8P3 1242 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 H7C4K7 107 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 TBCAO75347 108 aaKnown RBP16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 FAM13AO94988 1023 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 SEC24AO95486 1093 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms