RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 MAP3K13O43283 966 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 PSTPIP1O43586 416 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 RGS20O76081 388 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 PROSCO94903 275 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 LDHAP00338 332 aaKnown RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 CYP1A1P04798 512 aaPredicted RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 PTPRAP18433 802 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 ITIH2P19823 946 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 TBXAS1P24557 533 aaPredicted RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 SSTR3P32745 418 aaPredicted RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 KCNJ1P48048 391 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 GMPSP49915 693 aaPredicted RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 KRT17Q04695 432 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 NBPF12Q5TAG4 269 aaPredicted RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 GKAP1Q5VSY0 366 aaPredicted RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 MFSD5Q6N075 450 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 MMS22LQ6ZRQ5 1243 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 TAOK1Q7L7X3 1001 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 CPLX4Q7Z7G2 160 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 MICALL2Q8IY33 904 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 CNPY4Q8N129 248 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 ZNF516Q92618 1163 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 CHMP6Q96FZ7 201 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 SNF8Q96H20 258 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 VCPIP1Q96JH7 1222 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 SELENOSQ9BQE4 189 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 AZI2Q9H6S1 392 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 MRPL47Q9HD33 250 aaKnown RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 CYP39A1Q9NYL5 469 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 ASIC3Q9UHC3 531 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 DDX20Q9UHI6 824 aaKnown RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 ZNF214Q9UL59 606 aaPredicted RBP8.6□□□□□ -1.03
GPC3-204ENST00000631057 SCINQ9Y6U3 715 aa8.6□□□□□ -1.03
GPC3-204ENST00000631057 ANK1P16157 1881 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 MROH7Q68CQ1 1323 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 H0YHG0 523 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 EGFRP00533 1210 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 C4BPAP04003 597 aaKnown RBP8.59□□□□□ -1.03
GPC3-204ENST00000631057 OATP04181 439 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 ATF2P15336 505 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 CHN1P15882 459 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 DRD4P21917 467 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 FGFR4P22455 802 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 RRM1P23921 792 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 ATP5DP30049 168 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 ICAM3P32942 547 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 CETN2P41208 172 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 NAMPTP43490 491 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 HMGCS2P54868 508 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 NLRP11P59045 1033 aaKnown RBP8.59□□□□□ -1.03
GPC3-204ENST00000631057 SP4Q02446 784 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 CUL2Q13617 745 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 TMEM132BQ14DG7 1078 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 KCTD19Q17RG1 926 aaPredicted RBP8.59□□□□□ -1.03
GPC3-204ENST00000631057 TDRD10Q5VZ19 366 aaKnown RBP8.59□□□□□ -1.03
GPC3-204ENST00000631057 CEP128Q6ZU80 1094 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 MON1BQ7L1V2 547 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 CCDC25Q86WR0 208 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 APOBEC3FQ8IUX4 373 aaKnown RBP8.59□□□□□ -1.03
GPC3-204ENST00000631057 BBOF1Q8ND07 529 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.59□□□□□ -1.03
GPC3-204ENST00000631057 DEPTORQ8TB45 409 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 C1orf54Q8WWF1 131 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 CPA5Q8WXQ8 436 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 GLMNQ92990 594 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 SEC16BQ96JE7 1060 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 CABS1Q96KC9 395 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 DCBLD2Q96PD2 775 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 WRNIP1Q96S55 665 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 CGRRF1Q99675 332 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 BEGAINQ9BUH8 593 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 MSTO1Q9BUK6 570 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 DCLK3Q9C098 648 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 PORCNQ9H237 461 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 LRRC4CQ9HCJ2 640 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 A1CFQ9NQ94 594 aaKnown RBP8.59□□□□□ -1.03
GPC3-204ENST00000631057 ZNF302Q9NR11 478 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 PCDH10Q9P2E7 1040 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 PCDHB4Q9Y5E5 795 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 CAPN7Q9Y6W3 813 aa8.59□□□□□ -1.03
GPC3-204ENST00000631057 SSC5DA1L4H1 1573 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 GOLGA6L7A0A1B0GV03 622 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 LRRIQ4A6NIV6 560 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 SMIM23A6NLE4 172 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 K7ERI5 159 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 SORBS3O60504 671 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 CLTAP09496 248 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 ACO1P21399 889 aaKnown RBP8.58□□□□□ -1.04
GPC3-204ENST00000631057 GNA15P30679 374 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 ARL2P36404 184 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 RFC5P40937 340 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 AP3M2P53677 418 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 NOMO3P69849 1222 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 ACTN3Q08043 901 aaPredicted RBP8.58□□□□□ -1.04
GPC3-204ENST00000631057 SNX1Q13596 522 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 AUHQ13825 339 aaKnown RBP8.58□□□□□ -1.04
GPC3-204ENST00000631057 STXBP2Q15833 593 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 QPCTQ16769 361 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 ZNF568Q3ZCX4 644 aa8.58□□□□□ -1.04
GPC3-204ENST00000631057 TMEM259Q4ZIN3 620 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms