RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	KRT19	P08727	400 aa		28.08	■■■□□ 2.09
UBE3A-222	ENST00000630907	POLR2B	P30876	1174 aa	Known RBP	28.08	■■■□□ 2.09
UBE3A-222	ENST00000630907	DEFB123	Q8N688	67 aa		28.08	■■■□□ 2.09
UBE3A-222	ENST00000630907	LMAN2L	Q9H0V9	348 aa		28.08	■■■□□ 2.09
UBE3A-222	ENST00000630907	THAP9	Q9H5L6	903 aa		28.08	■■■□□ 2.09
UBE3A-222	ENST00000630907	R3HCC1	Q9Y3T6	440 aa	Known RBP	28.08	■■■□□ 2.09
UBE3A-222	ENST00000630907	SF3B1	O75533	1304 aa	Known RBP eCLIP	28.08	■■■□□ 2.09	6e-7	■■■■■ 109.6
UBE3A-222	ENST00000630907	CHD9	Q3L8U1	2897 aa		28.08	■■■□□ 2.09
UBE3A-222	ENST00000630907	TRAPPC3	O43617	180 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	STX10	O60499	249 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	LPXN	O60711	386 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	PHACTR2	O75167	634 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	C4BPA	P04003	597 aa	Known RBP	28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	DNAJB1	P25685	340 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	ELAVL2	Q12926	359 aa	Known RBP	28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	DCAF17	Q5H9S7	520 aa	Predicted RBP	28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	TCERG1L	Q5VWI1	586 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	CXorf38	Q8TB03	319 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	VN1R3	Q9BXE9	311 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	GPR62	Q9BZJ7	368 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	SIX4	Q9UIU6	781 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	NFE2L3	Q9Y4A8	694 aa		28.07	■■■□□ 2.08
UBE3A-222	ENST00000630907	EFEMP2	O95967	443 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	SOD2	P04179	222 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	PAX3	P23760	479 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	GTF2H1	P32780	548 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	BRCC3	P46736	316 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	GCLM	P48507	274 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	MARS	P56192	900 aa	Known RBP	28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	PPP3CA	Q08209	521 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	BIRC3	Q13489	604 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	PTPRO	Q16827	1216 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	TDRD10	Q5VZ19	366 aa	Known RBP	28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	SV2A	Q7L0J3	742 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	CREBRF	Q8IUR6	639 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	FAM114A1	Q8IWE2	563 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	VPS52	Q8N1B4	723 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	CNOT6L	Q96LI5	555 aa	Known RBP	28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	ZNF560	Q96MR9	790 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	TLR9	Q9NR96	1032 aa		28.06	■■■□□ 2.08
UBE3A-222	ENST00000630907	PNPLA4	P41247	253 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	TAF6	P49848	677 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	LILRA4	P59901	499 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	MYL5	Q02045	173 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	TRPC3	Q13507	836 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	CAMK1	Q14012	370 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	ZACN	Q401N2	412 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	SCARA3	Q6AZY7	606 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	IRF2BP1	Q8IU81	584 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	RNF168	Q8IYW5	571 aa	Predicted RBP	28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	LRRC52	Q8N7C0	313 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	BPIFA3	Q9BQP9	254 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	HERC2P3	Q9BVR0	1158 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	MMRN2	Q9H8L6	949 aa		28.05	■■■□□ 2.08
UBE3A-222	ENST00000630907	ERVFC1	P60507	584 aa		28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907	TIGD5	Q53EQ6	642 aa		28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907	FAM171A1	Q5VUB5	890 aa		28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907	TAS1R1	Q7RTX1	841 aa		28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907	TRIM59	Q8IWR1	403 aa		28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907	SLC35C1	Q96A29	364 aa		28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907	GAS2L1	Q99501	681 aa	Predicted RBP	28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907	TMEM8A	Q9HCN3	771 aa		28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907	SAMSN1	Q9NSI8	373 aa	Known RBP	28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907	MAGEC2	Q9UBF1	373 aa	Predicted RBP	28.04	■■■□□ 2.08
UBE3A-222	ENST00000630907		I3L4J1	428 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	SPTLC1	O15269	473 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	CSPG5	O95196	566 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	CST3	P01034	146 aa	Predicted RBP	28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	AARS	P49588	968 aa	Known RBP eCLIP	28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	ZNF165	P49910	485 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	BMS1	Q14692	1282 aa	Known RBP	28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	USP41	Q3LFD5	358 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	SV2C	Q496J9	727 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	DSTYK	Q6XUX3	929 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	C15orf39	Q6ZRI6	1047 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	TMC7	Q7Z402	723 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	MICAL1	Q8TDZ2	1067 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	MRPL38	Q96DV4	380 aa	Known RBP	28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	SUSD3	Q96L08	255 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	CDX2	Q99626	313 aa	Predicted RBP	28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	TCF25	Q9BQ70	676 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	ZBP1	Q9H171	429 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	ENTPD7	Q9NQZ7	604 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	MYO9B	Q13459	2157 aa		28.03	■■■□□ 2.08
UBE3A-222	ENST00000630907	PLXNA4	Q9HCM2	1894 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	CTSA	P10619	480 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	MYO1E	Q12965	1108 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	ADGRE1	Q14246	886 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	KRT39	Q6A163	491 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	PDE12	Q6L8Q7	609 aa	Known RBP	28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	KIAA1841	Q6NSI8	718 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	AOPEP	Q8N6M6	819 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	HPDL	Q96IR7	371 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	NGRN	Q9NPE2	291 aa	Known RBP	28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	MTMR10	Q9NXD2	777 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	LMCD1	Q9NZU5	365 aa		28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	28.02	■■■□□ 2.08
UBE3A-222	ENST00000630907	COL4A4	P53420	1690 aa	Predicted RBP	28.01	■■■□□ 2.07
UBE3A-222	ENST00000630907	SMTNL1	A8MU46	457 aa		28.01	■■■□□ 2.07
UBE3A-222	ENST00000630907	FSCN2	O14926	492 aa		28.01	■■■□□ 2.07

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms