RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 TDRD10Q5VZ19 366 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 FAM117BQ6P1L5 589 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 GAS2L3Q86XJ1 694 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 ZNF280BQ86YH2 543 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 C1orf127Q8N9H9 656 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 BEST2Q8NFU1 509 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 OR5B17Q8NGF7 314 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 CACTINQ8WUQ7 758 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 C18orf25Q96B23 403 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 ANKRD36BP1Q96IX9 119 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 POP1Q99575 1024 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 TUBGCP2Q9BSJ2 902 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 NRDE2Q9H7Z3 1164 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 MRPL42Q9Y6G3 142 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 GTPBP10A4D1E9 387 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 LCHNA4D1U4 455 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 GOLGA6L19H0YKK7 550 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 P4HA2O15460 535 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 N4BP1O75113 896 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 TNNC2P02585 160 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 ATP1A3P13637 1013 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 LAG3P18627 525 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 TNNI1P19237 187 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 RPL9P32969 192 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 MTIF2P46199 727 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 FMO5P49326 533 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 MXI1P50539 228 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 TPM4P67936 248 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 SMAD3P84022 425 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 TFAMQ00059 246 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 RNASELQ05823 741 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 KRT31Q15323 416 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 RAB30Q15771 203 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 UPP1Q16831 310 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 LRIT3Q3SXY7 679 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 CBWD6Q4V339 395 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 PAN2Q504Q3 1202 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 DCAF17Q5H9S7 520 aaPredicted RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 CBWD3Q5JTY5 395 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 CBWD5Q5RIA9 395 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 LMBRD2Q68DH5 695 aaPredicted RBP10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 KRT39Q6A163 491 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 SV2AQ7L0J3 742 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 TRAPPC11Q7Z392 1133 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 FIBCD1Q8N539 461 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 LRRC52Q8N7C0 313 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 VRTNQ9H8Y1 702 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 DPP3Q9NY33 737 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 DNAJB4Q9UDY4 337 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 SIX4Q9UIU6 781 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 COQ4Q9Y3A0 265 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 CHD9Q3L8U1 2897 aa10.63□□□□□ -0.71
SOX2-OT-249ENST00000628810 LINC01553A4QN01 128 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 GRXCR1A8MXD5 290 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 PIRO00625 290 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 VNN1O95497 513 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 STAU1O95793 577 aaKnown RBP10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 EFEMP2O95967 443 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 AFPP02771 609 aaKnown RBP10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 ITGB3P05106 788 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 GALTP07902 379 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 PAX3P23760 479 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 GCLMP48507 274 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 AARSP49588 968 aaKnown RBP eCLIP10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 CLCNKBP51801 687 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 GUCY2FP51841 1108 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 RABGGTBP53611 331 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 KCNH2Q12809 1159 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 VWA3BQ502W6 1294 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 HSP90AA4PQ58FG1 418 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 TCERG1LQ5VWI1 586 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 C9orf57Q5W0N0 161 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 ANKRD20A12PQ8NF67 263 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 FAM84AQ96KN4 292 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 PAAF1Q9BRP4 392 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 PBX4Q9BYU1 374 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 RBSNQ9H1K0 784 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 NDST4Q9H3R1 872 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 GOLGA2P5Q9HBQ8 144 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 MARCH5Q9NX47 278 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 YBX2Q9Y2T7 364 aaKnown RBP10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 RWDD3Q9Y3V2 267 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 TRIP11Q15643 1979 aa10.62□□□□□ -0.71
SOX2-OT-249ENST00000628810 TSC2P49815 1807 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 LAMA3Q16787 3333 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 CASTOR2A6NHX0 329 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 LGALS16A8MUM7 142 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 C5orf67F2Z3F1 127 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 PODXLO00592 558 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 ZC3H11AO75152 810 aaKnown RBP eCLIP10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 ARHGEF15O94989 841 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 KIF4AO95239 1232 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 CA3P07451 260 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 POLR2BP30876 1174 aaKnown RBP10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 ATICP31939 592 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 PPM1AP35813 382 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 PNPLA4P41247 253 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 SLC11A1P49279 550 aa10.61□□□□□ -0.71
SOX2-OT-249ENST00000628810 COPB1P53618 953 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms