RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 ASIC1P78348 528 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 POU5F1Q01860 360 aaKnown RBP17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 DNM1Q05193 864 aaKnown RBP17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 PKP1Q13835 747 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 TMEM132DQ14C87 1099 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 ZBTB6Q15916 424 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 CTXN3Q4LDR2 81 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 JADE1Q6IE81 842 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 ZNF280DQ6N043 979 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 SHC4Q6S5L8 630 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 RTL10Q7L3V2 364 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 USP37Q86T82 979 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 PBXIP1Q96AQ6 731 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 ZNF707Q96C28 371 aaPredicted RBP17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 TMEM206Q9H813 350 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 PCDHB8Q9UN66 801 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 DERAQ9Y315 318 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 STYXL1Q9Y6J8 313 aa17.28■□□□□ 0.36
CHRNA4-211ENST00000628606 DENND4AQ7Z401 1863 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 ARHGEF37A1IGU5 675 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 FRMD3A2A2Y4 597 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 POLR2DO15514 142 aaKnown RBP17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 PPP1R37O75864 691 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 LDHAP00338 332 aaKnown RBP17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 ADRB2P07550 413 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 PAX3P23760 479 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 SPATA1Q5VX52 437 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 HFE2Q6ZVN8 426 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 ZNF461Q8TAF7 563 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 SLC7A14Q8TBB6 771 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 FEZF2Q8TBJ5 459 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 STRA6Q9BX79 667 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 KBTBD4Q9NVX7 518 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 TECTAO75443 2155 aa17.27■□□□□ 0.36
CHRNA4-211ENST00000628606 TISP43B9A030 160 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 PRRG1O14668 218 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 CCL16O15467 120 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 IL18RAPO95256 599 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 PAPLNO95428 1278 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 ASGR2P07307 311 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 BECN1Q14457 450 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 E2F4Q16254 413 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 SLC8B1Q6J4K2 584 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 RSPO2Q6UXX9 243 aaPredicted RBP17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 SUGP1Q8IWZ8 645 aaKnown RBP17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 CEP57L1Q8IYX8 460 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 NOC3LQ8WTT2 800 aaKnown RBP17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 OXCT2Q9BYC2 517 aaPredicted RBP17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 TRIM9Q9C026 710 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 RAPGEFL1Q9UHV5 662 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 RCOR1Q9UKL0 485 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 C2CD2Q9Y426 696 aa17.26■□□□□ 0.35
CHRNA4-211ENST00000628606 M0QZQ0 153 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 PRPF6O94906 941 aaKnown RBP17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 LRG1P02750 347 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 NFICP08651 508 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 GARTP22102 1010 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 FSHRP23945 695 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 ADSSP30520 456 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 GUCY2FP51841 1108 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 KRT85P78386 507 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 ROR1Q01973 937 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 YWHAHQ04917 246 aaPredicted RBP17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 KCNA1Q09470 495 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 RESP18Q5W5W9 173 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 TPGS2Q68CL5 300 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 GET4Q7L5D6 327 aaPredicted RBP17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 BMP8AQ7Z5Y6 402 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 GRASPQ7Z6J2 395 aaPredicted RBP17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 FAM213AQ9BRX8 229 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 IGSF9Q9P2J2 1179 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 FBXL5Q9UKA1 691 aa17.25■□□□□ 0.35
CHRNA4-211ENST00000628606 CPB1P15086 417 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 ATF2P15336 505 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 CASP5P51878 434 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 LILRA4P59901 499 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 TDGQ13569 410 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 MRPL58Q14197 206 aaKnown RBP17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 ARMCX5Q6P1M9 558 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 NT5DC4Q86YG4 428 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 CACTINQ8WUQ7 758 aaKnown RBP17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 NXPE3Q969Y0 559 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 C7orf25Q9BPX7 421 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 IKZF4Q9H2S9 585 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 KCNK12Q9HB15 430 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 CYP4F11Q9HBI6 524 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 DPP3Q9NY33 737 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 KCNH3Q9ULD8 1083 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 MAFFQ9ULX9 164 aa17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 ZFP37Q9Y6Q3 630 aaPredicted RBP17.24■□□□□ 0.35
CHRNA4-211ENST00000628606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.23■□□□□ 0.35
CHRNA4-211ENST00000628606 WDR27A2RRH5 827 aa17.23■□□□□ 0.35
CHRNA4-211ENST00000628606 KIAA0391O15091 583 aaKnown RBP17.23■□□□□ 0.35
CHRNA4-211ENST00000628606 TBC1D4O60343 1298 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms