RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 IL18RAPO95256 599 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 LDHAP00338 332 aaKnown RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 EPCAMP16422 314 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 BMP6P22004 513 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 CLCN4P51793 760 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 SNRPFP62306 86 aaKnown RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 TMEM132DQ14C87 1099 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 SNRNP35Q16560 246 aaKnown RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 USP41Q3LFD5 358 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 LEXMQ3ZCV2 418 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 COBLL1Q53SF7 1204 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 FAM171A1Q5VUB5 890 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 C9orf57Q5W0N0 161 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 SYCE2Q6PIF2 218 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 RSPO2Q6UXX9 243 aaPredicted RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 HS2ST1Q7LGA3 356 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 SLC9A9Q8IVB4 645 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 GUF1Q8N442 669 aaKnown RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 ATXN2LQ8WWM7 1075 aaKnown RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 RIN2Q8WYP3 895 aaPredicted RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 PIK3R5Q8WYR1 880 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 PPP2R3CQ969Q6 453 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 SUSD3Q96L08 255 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 GSDMAQ96QA5 445 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 MRPL17Q9NRX2 175 aaKnown RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 LMBRD1Q9NUN5 540 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 CGNQ9P2M7 1197 aaKnown RBP8.53□□□□□ -1.04
CCDC163-204ENST00000628293 MAN1B1Q9UKM7 699 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 MAPK8IP1Q9UQF2 711 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 TRAF3IP3Q9Y228 551 aa8.53□□□□□ -1.04
CCDC163-204ENST00000628293 GRXCR2A6NFK2 248 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 M0QZQ0 153 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 TBC1D4O60343 1298 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 KINO60870 393 aaKnown RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 BMP1P13497 986 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 CD44P16070 742 aaKnown RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 RPL17P18621 184 aaKnown RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 PRCPP42785 496 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 CASP4P49662 377 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 CYP2J2P51589 502 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 MRPS5P82675 430 aaKnown RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 CYP24A1Q07973 514 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 ELAVL2Q12926 359 aaKnown RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 MRPL58Q14197 206 aaKnown RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 PSMD5Q16401 504 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 NFIL3Q16649 462 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 ZNF658Q5TYW1 1059 aaPredicted RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 LMBRD2Q68DH5 695 aaPredicted RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 ANKRD54Q6NXT1 300 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 LLGL2Q6P1M3 1020 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 NT5DC4Q86YG4 428 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 C1orf127Q8N9H9 656 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 XXYLT1Q8NBI6 393 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 SMRP1Q8NCR6 262 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 BEST2Q8NFU1 509 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 OR5B17Q8NGF7 314 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 BORCS6Q96GS4 357 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 MFSD14AQ96MC6 490 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 ASB2Q96Q27 587 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 CLSTN3Q9BQT9 956 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 TTPALQ9BTX7 342 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 MTMR12Q9C0I1 747 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 S1PR5Q9H228 398 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 INTS13Q9NVM9 706 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 DPP3Q9NY33 737 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 FNIP2Q9P278 1114 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 MTRRQ9UBK8 725 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 SIX4Q9UIU6 781 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 CDH22Q9UJ99 828 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.52□□□□□ -1.05
CCDC163-204ENST00000628293 DENND4CQ5VZ89 1909 aa8.52□□□□□ -1.05
CCDC163-204ENST00000628293 OBSL1O75147 1896 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 GREB1Q4ZG55 1949 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 FSD2A1L4K1 749 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 ZNF233A6NK53 670 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 SYN3O14994 580 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 MBTPS2O43462 519 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 XPOTO43592 962 aaKnown RBP8.51□□□□□ -1.05
CCDC163-204ENST00000628293 PAPLNO95428 1278 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 NR3C1P04150 777 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 IL9P15248 144 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 POLR2BP30876 1174 aaKnown RBP8.51□□□□□ -1.05
CCDC163-204ENST00000628293 MCM4P33991 863 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 CA8P35219 290 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 NDUFV1P49821 464 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 PMS1P54277 932 aaKnown RBP8.51□□□□□ -1.05
CCDC163-204ENST00000628293 LILRA4P59901 499 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 SMAD4Q13485 552 aaKnown RBP8.51□□□□□ -1.05
CCDC163-204ENST00000628293 MORC3Q14149 939 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 PSMD6Q15008 389 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 CLUL1Q15846 466 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 VARS2Q5ST30 1063 aaKnown RBP8.51□□□□□ -1.05
CCDC163-204ENST00000628293 C1orf220Q5T0J3 134 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 LILRA6Q6PI73 481 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 CEP57Q86XR8 500 aa8.51□□□□□ -1.05
CCDC163-204ENST00000628293 ZC3H3Q8IXZ2 948 aaKnown RBP8.51□□□□□ -1.05
CCDC163-204ENST00000628293 RDH13Q8NBN7 331 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms