RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 PRKAG3Q9UGI9 489 aa8.42□□□□□ -1.06
TCF4-260ENST00000627685 KIF3AQ9Y496 699 aa8.42□□□□□ -1.06
TCF4-260ENST00000627685 PHLPP2Q6ZVD8 1323 aa8.42□□□□□ -1.06
TCF4-260ENST00000627685 DENND4AQ7Z401 1863 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 C2orf71A6NGG8 1288 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 H3BQV1 296 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 ACKR2O00590 384 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 SLC26A4O43511 780 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 STX6O43752 255 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 RECQL4O94761 1208 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 NPTXRO95502 500 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 PRKCBP05771 671 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 CD33P20138 364 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 AKAP5P24588 427 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 DDIT3P35638 169 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 NCKAP1LP55160 1127 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 PTPN14Q15678 1187 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 SPECC1Q5M775 1068 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 SPOUT1Q5T280 376 aaKnown RBP8.41□□□□□ -1.06
TCF4-260ENST00000627685 SLC27A1Q6PCB7 646 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 SYCE2Q6PIF2 218 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 TAS1R1Q7RTX1 841 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 CABP7Q86V35 215 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 ABI1Q8IZP0 508 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 LINC00301Q8NCQ3 95 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 SMRP1Q8NCR6 262 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 C3orf58Q8NDZ4 430 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 FAM200AQ8TCP9 573 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 AUTS2Q8WXX7 1259 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 SUSD6Q92537 303 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 DNAJC19Q96DA6 116 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 ZMAT2Q96NC0 199 aaKnown RBP8.41□□□□□ -1.06
TCF4-260ENST00000627685 S1PR5Q9H228 398 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 NGRNQ9NPE2 291 aaKnown RBP8.41□□□□□ -1.06
TCF4-260ENST00000627685 TLR9Q9NR96 1032 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 PRMT7Q9NVM4 692 aaPredicted RBP8.41□□□□□ -1.06
TCF4-260ENST00000627685 CLDND1Q9NY35 253 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 PUF60Q9UHX1 559 aaKnown RBP8.41□□□□□ -1.06
TCF4-260ENST00000627685 BARX2Q9UMQ3 279 aaPredicted RBP8.41□□□□□ -1.06
TCF4-260ENST00000627685 SRPRBQ9Y5M8 271 aaKnown RBP8.41□□□□□ -1.06
TCF4-260ENST00000627685 IRAK3Q9Y616 596 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 MYO7AQ13402 2215 aa8.41□□□□□ -1.06
TCF4-260ENST00000627685 FRMD3A2A2Y4 597 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 NRP1O14786 923 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 PER2O15055 1255 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 MBTPS2O43462 519 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 ZC3H11AO75152 810 aaKnown RBP eCLIP8.4□□□□□ -1.06
TCF4-260ENST00000627685 ERLIN2O94905 339 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 POMCP01189 267 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 PIGRP01833 764 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 PLA2G4BP0C869 781 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 CTSAP10619 480 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 MARCKSP29966 332 aaPredicted RBP8.4□□□□□ -1.06
TCF4-260ENST00000627685 LONP1P36776 959 aaKnown RBP8.4□□□□□ -1.06
TCF4-260ENST00000627685 NRIP1P48552 1158 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 PEX3P56589 373 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 KRT17Q04695 432 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 ZP2Q05996 745 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 SOX4Q06945 474 aaPredicted RBP8.4□□□□□ -1.06
TCF4-260ENST00000627685 RAD51AP2Q09MP3 1159 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 GNL2Q13823 731 aaKnown RBP8.4□□□□□ -1.06
TCF4-260ENST00000627685 GIT2Q14161 759 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 TFDP1Q14186 410 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 SLC39A14Q15043 492 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 SMAD2Q15796 467 aaKnown RBP8.4□□□□□ -1.06
TCF4-260ENST00000627685 ZBTB41Q5SVQ8 909 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 KRT79Q5XKE5 535 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 SHC4Q6S5L8 630 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 GLB1LQ6UWU2 654 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 ALKAL1Q6UXT8 129 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 THNSL1Q8IYQ7 743 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 GJD3Q8N144 294 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 CNNM3Q8NE01 707 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 SLC22A17Q8WUG5 538 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 RAD54LQ92698 747 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 KIFAP3Q92845 792 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 PGBD4Q96DM1 585 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 ZBTB45Q96K62 511 aaPredicted RBP8.4□□□□□ -1.06
TCF4-260ENST00000627685 PPP1R10Q96QC0 940 aaKnown RBP8.4□□□□□ -1.06
TCF4-260ENST00000627685 ACO2Q99798 780 aaKnown RBP8.4□□□□□ -1.06
TCF4-260ENST00000627685 TCF25Q9BQ70 676 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 C1QTNF1Q9BXJ1 281 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 CHST7Q9NS84 486 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 SPG21Q9NZD8 308 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 STK39Q9UEW8 545 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 TNFSF13BQ9Y275 285 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 INPP5FQ9Y2H2 1132 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 GIT1Q9Y2X7 761 aa8.4□□□□□ -1.06
TCF4-260ENST00000627685 TISP43B9A030 160 aa8.39□□□□□ -1.07
TCF4-260ENST00000627685 PI4K2BG5E9Z4 385 aa8.39□□□□□ -1.07
TCF4-260ENST00000627685 CLASP2O75122 1294 aaKnown RBP8.39□□□□□ -1.07
TCF4-260ENST00000627685 ADRB2P07550 413 aa8.39□□□□□ -1.07
TCF4-260ENST00000627685 PLS3P13797 630 aa8.39□□□□□ -1.07
TCF4-260ENST00000627685 NCBP1Q09161 790 aaKnown RBP8.39□□□□□ -1.07
TCF4-260ENST00000627685 COASYQ13057 564 aa8.39□□□□□ -1.07
TCF4-260ENST00000627685 SMAD4Q13485 552 aaKnown RBP8.39□□□□□ -1.07
TCF4-260ENST00000627685 SAMD5Q5TGI4 173 aa8.39□□□□□ -1.07
TCF4-260ENST00000627685 PLPP4Q5VZY2 271 aa8.39□□□□□ -1.07
TCF4-260ENST00000627685 DDX53Q86TM3 631 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms