RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ZNF157P51786 506 aaPredicted RBP13.45□□□□□ -0.26
SCN8A-209ENST00000627620 CCZ1BP86790 482 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 CCZ1P86791 482 aaPredicted RBP13.45□□□□□ -0.26
SCN8A-209ENST00000627620 SPATA21Q7Z572 469 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 LRRC71Q8N4P6 559 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 SCFD1Q8WVM8 642 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 KDM4CQ9H3R0 1056 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 TMEM8AQ9HCN3 771 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 KBTBD13C9JR72 458 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 ASMTLO95671 621 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 PYGLP06737 847 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 LONRF1Q17RB8 773 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 EFCAB12Q6NXP0 572 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 MFN1Q8IWA4 741 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 AGBL1Q96MI9 1066 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 TSC22D3Q99576 134 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 TMEM39BQ9GZU3 492 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 TRIM10Q9UDY6 481 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 SCAF8Q9UPN6 1271 aaKnown RBP13.45□□□□□ -0.26
SCN8A-209ENST00000627620 SMG5Q9UPR3 1016 aaKnown RBP13.45□□□□□ -0.26
SCN8A-209ENST00000627620 SLC25A27O95847 323 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 ALDH1A1P00352 501 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 RPA1P27694 616 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 KCNJ6P48051 423 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 RAB42Q8N4Z0 105 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 DACH2Q96NX9 599 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 RUBCNLQ9H714 662 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 PCDHB2Q9Y5E7 798 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 ICA1LQ8NDH6 482 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 ZNF507Q8TCN5 953 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCN8A-209ENST00000627620 PTPRN2Q92932 1015 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 C9orf72Q96LT7 481 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 SLC38A7Q9NVC3 462 aa13.45□□□□□ -0.26
SCN8A-209ENST00000627620 MAFGO15525 162 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 HIST1H2AGP0C0S8 130 aaPredicted RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 WEE2P0C1S8 567 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 HIST1H2ADP20671 130 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 HMOX2P30519 316 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 HIST1H2AHQ96KK5 128 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 SEPT5Q99719 369 aaPredicted RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 HIST1H2AJQ99878 128 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 H2AFJQ9BTM1 129 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 KCNH7Q9NS40 1196 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 FAM95CA0A1B0GW59 222 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 CFAP73A6NFT4 308 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 EXTL3O43909 919 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 UPP2O95045 317 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 ZC3H12BQ5HYM0 836 aaKnown RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 IL31Q6EBC2 164 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 NR1H4Q96RI1 486 aaPredicted RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 NEUROG2Q9H2A3 272 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 ARHGEF38Q9NXL2 777 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 STX18Q9P2W9 335 aaKnown RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 IGSF9BQ9UPX0 1349 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 IL10P22301 178 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 USP10Q14694 798 aaKnown RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 TRADDQ15628 312 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 SV2CQ496J9 727 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 RRM2BQ7LG56 351 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 ELMO2Q96JJ3 720 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 MYOZ2Q9NPC6 264 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 QRICH2Q9H0J4 1663 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 ANGPT2O15123 496 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 ZSCAN9O15535 394 aaPredicted RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 CYP2C9P11712 490 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 FDPSP14324 419 aaKnown RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 ST8SIA6P61647 398 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 KDSRQ06136 332 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 SKIV2LQ15477 1246 aaKnown RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 UGP2Q16851 508 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 SYTL3Q4VX76 610 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 TRAPPC11Q7Z392 1133 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 ZNF512Q96ME7 567 aaPredicted RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 PRMT7Q9NVM4 692 aaPredicted RBP13.44□□□□□ -0.26
SCN8A-209ENST00000627620 ERAP1Q9NZ08 941 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 C1orf167Q5SNV9 1468 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
SCN8A-209ENST00000627620 SPATA31A1Q5TZJ5 1347 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 CDH16O75309 829 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 COMTP21964 271 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 MAP4P27816 1152 aaKnown RBP13.43□□□□□ -0.26
SCN8A-209ENST00000627620 GMPSP49915 693 aaPredicted RBP13.43□□□□□ -0.26
SCN8A-209ENST00000627620 SNX17Q15036 470 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 GPAT2Q6NUI2 795 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 TAGAPQ8N103 731 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 CHST13Q8NET6 341 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 FAM118BQ9BPY3 351 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 KCNF1Q9H3M0 494 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.43□□□□□ -0.26
SCN8A-209ENST00000627620 ADGRB3O60242 1522 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 ATICP31939 592 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 RAD23BP54727 409 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 SNRPFP62306 86 aaKnown RBP13.43□□□□□ -0.26
SCN8A-209ENST00000627620 ACTN3Q08043 901 aaPredicted RBP13.43□□□□□ -0.26
SCN8A-209ENST00000627620 FLOT2Q14254 428 aa13.43□□□□□ -0.26
SCN8A-209ENST00000627620 HIC1Q14526 733 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms