RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CETPP11597 493 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 CD58P19256 250 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 ATP5DP30049 168 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 BPIFB4P59827 614 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 ELF3P78545 371 aaPredicted RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 ADCY1Q08828 1119 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 ZNF365Q70YC5 407 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 ANKS1BQ7Z6G8 1248 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 CCDC60Q8IWA6 550 aaPredicted RBP11.98□□□□□ -0.49
VARS2-213ENST00000625423 MCPH1Q8NEM0 835 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 SENP7Q9BQF6 1050 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 CYP26B1Q9NR63 512 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 ARHGAP28Q9P2N2 729 aa11.98□□□□□ -0.49
VARS2-213ENST00000625423 C4BPAP04003 597 aaKnown RBP11.97□□□□□ -0.49
VARS2-213ENST00000625423 BRAFP15056 766 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 KCNA2P16389 499 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 PRKCEQ02156 737 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 CAV1Q03135 178 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 ZACNQ401N2 412 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 NUGGCQ68CJ6 796 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 SEPT14Q6ZU15 432 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 RHOT1Q8IXI2 618 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 GPRASP2Q96D09 838 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 ZBED3Q96IU2 234 aaPredicted RBP11.97□□□□□ -0.49
VARS2-213ENST00000625423 C9orf72Q96LT7 481 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 ADAM22Q9P0K1 906 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 NEU2Q9Y3R4 380 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 MGRN1O60291 552 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 RGS20O76081 388 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 VNN1O95497 513 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 GSTA1P08263 222 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 FDX1P10109 184 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 PSMD6Q15008 389 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 MTERF2Q49AM1 385 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 TMEM270Q6UE05 265 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 CEP57Q86XR8 500 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 CCDC63Q8NA47 563 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 OSBPL8Q9BZF1 889 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 ATP6V0A4Q9HBG4 840 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 APOBEC3GQ9HC16 384 aaKnown RBP11.97□□□□□ -0.49
VARS2-213ENST00000625423 ZNRF3Q9ULT6 936 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 USP15Q9Y4E8 981 aaPredicted RBP11.97□□□□□ -0.49
VARS2-213ENST00000625423 PCDHB4Q9Y5E5 795 aa11.97□□□□□ -0.49
VARS2-213ENST00000625423 OAS1P00973 400 aaKnown RBP11.96□□□□□ -0.49
VARS2-213ENST00000625423 PSAPP07602 524 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 ACO1P21399 889 aaKnown RBP11.96□□□□□ -0.49
VARS2-213ENST00000625423 CXCL9Q07325 125 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 MAMLD1Q13495 774 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 CCNG2Q16589 344 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 LIN9Q5TKA1 542 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 IZUMO3Q5VZ72 239 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.49
VARS2-213ENST00000625423 TBC1D1Q86TI0 1168 aaPredicted RBP11.96□□□□□ -0.49
VARS2-213ENST00000625423 ZBTB45Q96K62 511 aaPredicted RBP11.96□□□□□ -0.49
VARS2-213ENST00000625423 TEPSINQ96N21 525 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 YY1AP1Q9H869 796 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 MYOZ2Q9NPC6 264 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 KLHL11Q9NVR0 708 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 AGAP1Q9UPQ3 857 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 PSTPIP1O43586 416 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 UBOX5O94941 541 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 GNA15P30679 374 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 NOMO3P69849 1222 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 CLDN10P78369 228 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 PTP4A2Q12974 167 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 CUL2Q13617 745 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 ZKSCAN8Q15776 578 aaPredicted RBP11.96□□□□□ -0.49
VARS2-213ENST00000625423 GSTA5Q7RTV2 222 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.96□□□□□ -0.49
VARS2-213ENST00000625423 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 HAPLN2Q9GZV7 340 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 JPH1Q9HDC5 661 aaPredicted RBP11.96□□□□□ -0.49
VARS2-213ENST00000625423 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.49
VARS2-213ENST00000625423 NAALADL1Q9UQQ1 740 aa11.96□□□□□ -0.49
VARS2-213ENST00000625423 EGFRP00533 1210 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 RTP1P59025 263 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 ATP13A4Q4VNC1 1196 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 SRRM1Q8IYB3 904 aaKnown RBP11.96□□□□□ -0.5
VARS2-213ENST00000625423 ABRAQ8N0Z2 381 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 CCDC89Q8N998 374 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 CKAP2Q8WWK9 683 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 TCP11Q8WWU5 503 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 TMEM143Q96AN5 459 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 KIAA1586Q9HCI6 787 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 SLC9A2Q9UBY0 812 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 PSME4Q14997 1843 aa11.96□□□□□ -0.5
VARS2-213ENST00000625423 PI4K2BG5E9Z4 385 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 TLR3O15455 904 aaKnown RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 DKC1O60832 514 aaKnown RBP eCLIP11.95□□□□□ -0.5
VARS2-213ENST00000625423 TCEA3O75764 348 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 DPEP1P16444 411 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 GSCP56915 257 aaPredicted RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 ACTR2P61160 394 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 ENPEPQ07075 957 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 ZBTB41Q5SVQ8 909 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 XRRA1Q6P2D8 792 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 KATNAL2Q8IYT4 538 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms