RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 ZNF528Q3MIS6 628 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 FAM78AQ5JUQ0 283 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 CYP4A22Q5TCH4 519 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 TPGS2Q68CL5 300 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 IQCEQ6IPM2 695 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 ZNF280DQ6N043 979 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 ZNF852Q6ZMS4 543 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 APPL2Q8NEU8 664 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 ATRIPQ8WXE1 791 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 SUSD3Q96L08 255 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 ZNF512Q96ME7 567 aaPredicted RBP20.72■□□□□ 0.91
SMN1-211ENST00000625245 PLIN2Q99541 437 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 BRD9Q9H8M2 597 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 ZFP14Q9HCL3 533 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 DCHS1Q96JQ0 3298 aa20.72■□□□□ 0.91
SMN1-211ENST00000625245 MEFVO15553 781 aaPredicted RBP20.71■□□□□ 0.91
SMN1-211ENST00000625245 TOM1L1O75674 476 aa20.71■□□□□ 0.91
SMN1-211ENST00000625245 PRPHP41219 470 aa20.71■□□□□ 0.91
SMN1-211ENST00000625245 SMTNP53814 917 aa20.71■□□□□ 0.91
SMN1-211ENST00000625245 NOLC1Q14978 699 aaKnown RBP eCLIP20.71■□□□□ 0.91
SMN1-211ENST00000625245 SLC10A6Q3KNW5 377 aa20.71■□□□□ 0.91
SMN1-211ENST00000625245 MCTP1Q6DN14 999 aa20.71■□□□□ 0.91
SMN1-211ENST00000625245 HS6ST3Q8IZP7 471 aa20.71■□□□□ 0.91
SMN1-211ENST00000625245 SUMF1Q8NBK3 374 aa20.71■□□□□ 0.91
SMN1-211ENST00000625245 DDX12PQ92771 950 aa20.71■□□□□ 0.91
SMN1-211ENST00000625245 TIPINQ9BVW5 301 aa20.71■□□□□ 0.91
SMN1-211ENST00000625245 MRPS17Q9Y2R5 130 aaKnown RBP20.71■□□□□ 0.91
SMN1-211ENST00000625245 MYL4P12829 197 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 PLS3P13797 630 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 CPB1P15086 417 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 GUCY2CP25092 1073 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 CCR2P41597 374 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 SPAG1Q07617 926 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 TWF1Q12792 350 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 TSSK4Q6SA08 328 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 DGLUCYQ7Z3D6 616 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 TMEM130Q8N3G9 435 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 CLDN23Q96B33 292 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 NTPCRQ9BSD7 190 aaKnown RBP20.7■□□□□ 0.9
SMN1-211ENST00000625245 TRMT61BQ9BVS5 477 aaKnown RBP20.7■□□□□ 0.9
SMN1-211ENST00000625245 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.7■□□□□ 0.9
SMN1-211ENST00000625245 NCDNQ9UBB6 729 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 TUBGCP4Q9UGJ1 667 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 AFF4Q9UHB7 1163 aaKnown RBP20.7■□□□□ 0.9
SMN1-211ENST00000625245 KCNG1Q9UIX4 513 aa20.7■□□□□ 0.9
SMN1-211ENST00000625245 NDRG2Q9UN36 371 aaKnown RBP20.7■□□□□ 0.9
SMN1-211ENST00000625245 F5P12259 2224 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 CLDN3O15551 220 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 FCARP24071 287 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 TMEM161BQ8NDZ6 487 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 SPIRE2Q8WWL2 714 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 DNASE1L2Q92874 299 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 BICD1Q96G01 975 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 ZSWIM3Q96MP5 696 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 PNMA5Q96PV4 448 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 CEP72Q9P209 647 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 PCDHB8Q9UN66 801 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 PCDHGA2Q9Y5H1 932 aa20.69■□□□□ 0.9
SMN1-211ENST00000625245 NRG2O14511 850 aaPredicted RBP20.68■□□□□ 0.9
SMN1-211ENST00000625245 SPTLC1O15269 473 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 MICAL2O94851 1124 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 CXCL8P10145 99 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 MAPTP10636 758 aaKnown RBP20.68■□□□□ 0.9
SMN1-211ENST00000625245 GJA1P17302 382 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 GDI1P31150 447 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 RPS9P46781 194 aaKnown RBP20.68■□□□□ 0.9
SMN1-211ENST00000625245 ZPBP2Q6X784 338 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 RNF19BQ6ZMZ0 732 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 SYT2Q8N9I0 419 aaPredicted RBP20.68■□□□□ 0.9
SMN1-211ENST00000625245 BORCS6Q96GS4 357 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 CDK5RAP3Q96JB5 506 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 ASB16Q96NS5 453 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 ZSCAN32Q9NX65 697 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 TIMM13Q9Y5L4 95 aaPredicted RBP20.68■□□□□ 0.9
SMN1-211ENST00000625245 GPR179Q6PRD1 2367 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 TICRRQ7Z2Z1 1910 aa20.68■□□□□ 0.9
SMN1-211ENST00000625245 NPHP3-ACAD11A0A0J9YXS1 232 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 MAN2B1O00754 1011 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 PLA2G4BP0C869 781 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 VIPR2P41587 438 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 CACNB1Q02641 598 aaPredicted RBP20.67■□□□□ 0.9
SMN1-211ENST00000625245 PUM1Q14671 1186 aaKnown RBP eCLIP20.67■□□□□ 0.9
SMN1-211ENST00000625245 ERICH6BQ5W0A0 696 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 SMARCD2Q92925 531 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 IRF7Q92985 503 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 KIF12Q96FN5 646 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 KIF2CQ99661 725 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 ASAH2Q9NR71 780 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 MAFFQ9ULX9 164 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 KIF3AQ9Y496 699 aa20.67■□□□□ 0.9
SMN1-211ENST00000625245 CEP250Q9BV73 2442 aa20.66■□□□□ 0.9
SMN1-211ENST00000625245 VWA3AA6NCI4 1184 aa20.66■□□□□ 0.9
SMN1-211ENST00000625245 SHISA7A6NL88 538 aa20.66■□□□□ 0.9
SMN1-211ENST00000625245 MOSPD3O75425 235 aa20.66■□□□□ 0.9
SMN1-211ENST00000625245 CLTAP09496 248 aa20.66■□□□□ 0.9
SMN1-211ENST00000625245 OR4Q2P0C623 313 aa20.66■□□□□ 0.9
SMN1-211ENST00000625245 PSMC3P17980 439 aa20.66■□□□□ 0.9
SMN1-211ENST00000625245 ATP2C1P98194 919 aaPredicted RBP20.66■□□□□ 0.9
SMN1-211ENST00000625245 YWHAHQ04917 246 aaPredicted RBP20.66■□□□□ 0.9
SMN1-211ENST00000625245 MCL1Q07820 350 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms