RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TISP43B9A030 160 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 C2CD2LO14523 706 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 P4HA2O15460 535 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 IL1R1P14778 569 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 CA4P22748 312 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 ZNF76P36508 570 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 OCRLQ01968 901 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 CENPCQ03188 943 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 USH1GQ495M9 461 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 KRT27Q7Z3Y8 459 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 ZCCHC9Q8N567 271 aaKnown RBP14.97□□□□□ -0.01
LDB3-209ENST00000623056 CFAP57Q96MR6 1250 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 NPHS2Q9NP85 383 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 ANAPC7Q9UJX3 599 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 POC1B-GALNT4F8VUJ3 575 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 HNRNPCL1O60812 293 aaKnown RBP14.97□□□□□ -0.01
LDB3-209ENST00000623056 ATP9AO75110 1047 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 KRT36O76013 467 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 FOSP01100 380 aaPredicted RBP14.97□□□□□ -0.01
LDB3-209ENST00000623056 SKIP12755 728 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 TAL1P17542 331 aaPredicted RBP14.97□□□□□ -0.01
LDB3-209ENST00000623056 ADRA2BP18089 450 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 KRT15P19012 456 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 MAPK4P31152 587 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 PLEKHG4Q58EX7 1191 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 HHATQ5VTY9 493 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 TDRPQ86YL5 185 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 PPM1KQ8N3J5 372 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 CCDC89Q8N998 374 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 TRAPPC9Q96Q05 1148 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 STRA6Q9BX79 667 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 HEMGNQ9BXL5 484 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 SAYSD1Q9NPB0 183 aa14.97□□□□□ -0.01
LDB3-209ENST00000623056 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.97□□□□□ -0.01
LDB3-209ENST00000623056 ATRNL1Q5VV63 1379 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 UFL1O94874 794 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 GSTA2P09210 222 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 SLURP2P0DP57 97 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 CYP11B1P15538 503 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 HOXA13P31271 388 aaPredicted RBP14.96□□□□□ -0.01
LDB3-209ENST00000623056 POLE2P56282 527 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 MYBPC2Q14324 1141 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 PDCD2Q16342 344 aaPredicted RBP14.96□□□□□ -0.01
LDB3-209ENST00000623056 FYB2Q5VWT5 728 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 OTOP1Q7RTM1 612 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 PLEKHO2Q8TD55 490 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 SHC3Q92529 594 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 ZNF75CPQ92670 426 aaPredicted RBP14.96□□□□□ -0.01
LDB3-209ENST00000623056 AMNQ9BXJ7 453 aa14.96□□□□□ -0.01
LDB3-209ENST00000623056 KCNA3P22001 575 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 KLF1Q13351 362 aaPredicted RBP14.95□□□□□ -0.02
LDB3-209ENST00000623056 KPNB1Q14974 876 aaKnown RBP14.95□□□□□ -0.02
LDB3-209ENST00000623056 ACSBG2Q5FVE4 666 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 ACAD10Q6JQN1 1059 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 LRRC74BQ6ZQY2 392 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 ZC3H18Q86VM9 953 aaKnown RBP14.95□□□□□ -0.02
LDB3-209ENST00000623056 DDX27Q96GQ7 796 aaKnown RBP14.95□□□□□ -0.02
LDB3-209ENST00000623056 FGD4Q96M96 766 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 BTBD10Q9BSF8 475 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 PPP1R12CQ9BZL4 782 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 METTL5Q9NRN9 209 aaKnown RBP14.95□□□□□ -0.02
LDB3-209ENST00000623056 KANSL3Q9P2N6 904 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 MYH11P35749 1972 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 ZNFX1Q9P2E3 1918 aaKnown RBP14.95□□□□□ -0.02
LDB3-209ENST00000623056 BRWD3Q6RI45 1802 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 IGLV3-22A0A075B6J6 115 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 CAPN9O14815 690 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 TYROBPO43914 113 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 CCDC22O60826 627 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 RALAP11233 206 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 ADSSP30520 456 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 MXI1P50539 228 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 CACNA2D1P54289 1103 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 SLC34A1Q06495 639 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 P3H1Q32P28 736 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 PCNX4Q63HM2 1172 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 LVRNQ6Q4G3 990 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 ZSWIM2Q8NEG5 633 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 LBHD1Q9BQE6 289 aaPredicted RBP14.95□□□□□ -0.02
LDB3-209ENST00000623056 TMEM117Q9H0C3 514 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 SENP1Q9P0U3 644 aa14.95□□□□□ -0.02
LDB3-209ENST00000623056 WRAP73Q9P2S5 460 aaPredicted RBP14.95□□□□□ -0.02
LDB3-209ENST00000623056 A0A1W2PPM1 405 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 F5H6K3 240 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 K7ENM7 598 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 SMAPO00193 183 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 RNF8O76064 485 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 PLS3P13797 630 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 KLRC2P26717 231 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 MFAP3P55082 362 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 MAPK6Q16659 721 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 SLFN13Q68D06 897 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 ZNF398Q8TD17 642 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 DCAF4Q8WV16 495 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 PTCD3Q96EY7 689 aaKnown RBP14.94□□□□□ -0.02
LDB3-209ENST00000623056 CBWD1Q9BRT8 395 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 ARL8BQ9NVJ2 186 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 DCTN4Q9UJW0 460 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 GREB1LQ9C091 1923 aaPredicted RBP14.94□□□□□ -0.02
LDB3-209ENST00000623056 GSC2O15499 205 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms