RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TDRD15B5MCY1 1934 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 FSD2A1L4K1 749 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 LGALS16A8MUM7 142 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 SERPINC1P01008 464 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 SOX4Q06945 474 aaPredicted RBP21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 TDRD10Q5VZ19 366 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 CXorf38Q8TB03 319 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 CWH43Q9H720 699 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 MMRN2Q9H8L6 949 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 DPP3Q9NY33 737 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 ITGA11Q9UKX5 1188 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 COQ4Q9Y3A0 265 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 COL4A4P53420 1690 aaPredicted RBP21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 EYSQ5T1H1 3165 aa21.4■■□□□ 1.02
PDLIM2-221ENST00000622702 A0A1B0GTH6 734 aa21.39■■□□□ 1.02
PDLIM2-221ENST00000622702 FOSL2P15408 326 aa21.39■■□□□ 1.02
PDLIM2-221ENST00000622702 LRPAP1P30533 357 aa21.39■■□□□ 1.02
PDLIM2-221ENST00000622702 RNASELQ05823 741 aaKnown RBP21.39■■□□□ 1.02
PDLIM2-221ENST00000622702 FILIP1LQ4L180 1135 aa21.39■■□□□ 1.02
PDLIM2-221ENST00000622702 SARM1Q6SZW1 724 aa21.39■■□□□ 1.02
PDLIM2-221ENST00000622702 GDPD5Q8WTR4 605 aa21.39■■□□□ 1.02
PDLIM2-221ENST00000622702 RTN4Q9NQC3 1192 aaKnown RBP21.39■■□□□ 1.02
PDLIM2-221ENST00000622702 GTPBP10A4D1E9 387 aaKnown RBP21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 DDHD2O94830 711 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 IGFBP4P22692 258 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 RPL9P32969 192 aaKnown RBP21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 GUCY2FP51841 1108 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 MYL7Q01449 175 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 BIRC3Q13489 604 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 ADGRE1Q14246 886 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 ZNF280BQ86YH2 543 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 COLGALT2Q8IYK4 626 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 UROC1Q96N76 676 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 SIX4Q9UIU6 781 aa21.39■■□□□ 1.01
PDLIM2-221ENST00000622702 COL6A3P12111 3177 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 ANO9A1A5B4 782 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 C5orf67F2Z3F1 127 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 B4GALT3O60512 393 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 VNN1O95497 513 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 RB1P06400 928 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 UBASH3AP57075 661 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 CETN1Q12798 172 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 GPM6BQ13491 265 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 FBXL13Q8NEE6 735 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 TAS1R2Q8TE23 839 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 DDX27Q96GQ7 796 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 NAP1L5Q96NT1 182 aaPredicted RBP21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 FAM193BQ96PV7 902 aaPredicted RBP21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 NRDE2Q9H7Z3 1164 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 GOLGA2P5Q9HBQ8 144 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 AAASQ9NRG9 546 aa21.38■■□□□ 1.01
PDLIM2-221ENST00000622702 GOLGA6L3A6NEY3 463 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 H3BNC9 293 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 PES1O00541 588 aaKnown RBP21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 PIRO00625 290 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 LPXNO60711 386 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 PHACTR2O75167 634 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 ITGB3P05106 788 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 RBP5P82980 135 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 NCOA4Q13772 614 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 NR1I3Q14994 352 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 FKBP15Q5T1M5 1219 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 C9orf57Q5W0N0 161 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 TMEM175Q9BSA9 504 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 C11orf84Q9BUA3 381 aaPredicted RBP21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 PLVAPQ9BX97 442 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 IFNKQ9P0W0 207 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 STXBP5LQ9Y2K9 1186 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 PCDHB12Q9Y5F1 795 aa21.37■■□□□ 1.01
PDLIM2-221ENST00000622702 CASTOR2A6NHX0 329 aa21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 CST3P01034 146 aaPredicted RBP21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 HLA-DRAP01903 254 aa21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 LAG3P18627 525 aa21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 POLR2BP30876 1174 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 UPP1Q16831 310 aa21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 TMEM130Q8N3G9 435 aa21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 LRRC52Q8N7C0 313 aa21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 COLGALT1Q8NBJ5 622 aa21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 RAB20Q9NX57 234 aa21.36■■□□□ 1.01
PDLIM2-221ENST00000622702 AP5Z1O43299 807 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 PIK3CAP42336 1068 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 CLCNKBP51801 687 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 UBXN1Q04323 297 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 TRPC3Q13507 836 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 SCARA3Q6AZY7 606 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 KCNT2Q6UVM3 1135 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 GBP6Q6ZN66 633 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 KLHL23Q8NBE8 558 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 DNAJB4Q9UDY4 337 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 AGAP1Q9UPQ3 857 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 R3HCC1Q9Y3T6 440 aaKnown RBP21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 REV3LO60673 3130 aa21.35■■□□□ 1.01
PDLIM2-221ENST00000622702 CARNS1A5YM72 827 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 PODXLO00592 558 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 TEX33O43247 280 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 CBFA2T2O43439 604 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 ZC3H11AO75152 810 aaKnown RBP eCLIP21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 STAU1O95793 577 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 TPM3P06753 285 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 KRT19P08727 400 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms