RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FRMPD4Q14CM0 1322 aa13.22□□□□□ -0.29
LITAF-221ENST00000622633 DCDC2CA8MYV0 355 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 TISP43B9A030 160 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 BOLA2-SMG1P6H3BVE0 249 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 PYGMP11217 842 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 ETS2P15036 469 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 KCNA3P22001 575 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 DLG4P78352 724 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 CEP55Q53EZ4 464 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 ERMARDQ5T6L9 678 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 OLFML2BQ68BL8 750 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 AADACL2Q6P093 401 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 STXBP4Q6ZWJ1 553 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.21□□□□□ -0.29
LITAF-221ENST00000622633 STK32AQ8WU08 396 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 SLC20A1Q8WUM9 679 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 SEC14L1Q92503 715 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 SMC6Q96SB8 1091 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 SIKE1Q9BRV8 207 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 TCHPQ9BT92 498 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.21□□□□□ -0.293e-7■■■□□ 18
LITAF-221ENST00000622633 ERVK-5Q9HDB9 667 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 FAM114A2Q9NRY5 505 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 PKD2L1Q9P0L9 805 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 SEL1LQ9UBV2 794 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 TTC7AQ9ULT0 858 aaPredicted RBP13.21□□□□□ -0.29
LITAF-221ENST00000622633 ARHGEF35A5YM69 484 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 PDE6CP51160 858 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 BFSP1Q12934 665 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 BIRC3Q13489 604 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 MTMR3Q13615 1198 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 BCL2A1Q16548 175 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 DAB2IPQ5VWQ8 1189 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 CYP4X1Q8N118 509 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 ALG3Q92685 438 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 GATA6Q92908 595 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 AGPAT1Q99943 283 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 LXNQ9BS40 222 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 UBE2TQ9NPD8 197 aaPredicted RBP13.21□□□□□ -0.29
LITAF-221ENST00000622633 PDP2Q9P2J9 529 aa13.21□□□□□ -0.29
LITAF-221ENST00000622633 CHORDC1Q9UHD1 332 aaPredicted RBP13.21□□□□□ -0.29
LITAF-221ENST00000622633 SPATA31A6Q5VVP1 1343 aa13.21□□□□□ -0.3
LITAF-221ENST00000622633 DYTNA2CJ06 578 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 ANKRD62A6NC57 917 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 TMEM110-MUSTN1A8MSY1 372 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 TCP10L2B9ZVM9 353 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 TJP3O95049 919 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 PTDSS1P48651 473 aaKnown RBP13.2□□□□□ -0.3
LITAF-221ENST00000622633 ARPC4P59998 168 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 PTENP60484 403 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 COPS2P61201 443 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 FKBP1AP62942 108 aaKnown RBP13.2□□□□□ -0.3
LITAF-221ENST00000622633 DR1Q01658 176 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 BNIP1Q12981 228 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 ZYXQ15942 572 aaKnown RBP13.2□□□□□ -0.3
LITAF-221ENST00000622633 KRT71Q3SY84 523 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 DAW1Q8N136 415 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 LMO3Q8TAP4 145 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 ZNF333Q96JL9 665 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 CATSPER2Q96P56 530 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 CTTNBP2NLQ9P2B4 639 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.2□□□□□ -0.3
LITAF-221ENST00000622633 LRCH1Q9Y2L9 728 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 MYPNQ86TC9 1320 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 MAGEA13PA6NCF6 341 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 SIGLEC16A6NMB1 481 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 MAGEB3O15480 346 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 ENTPD3O75355 529 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 GSTT2P0CG29 244 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 GSTT2BP0CG30 244 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
LITAF-221ENST00000622633 MAPK7Q13164 816 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 KIF22Q14807 665 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 AOC3Q16853 763 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 ARHGEF19Q8IW93 802 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 SLC43A3Q8NBI5 491 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 RBBP8NLQ8NC74 664 aaPredicted RBP13.2□□□□□ -0.3
LITAF-221ENST00000622633 LSM14AQ8ND56 463 aaKnown RBP13.2□□□□□ -0.3
LITAF-221ENST00000622633 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
LITAF-221ENST00000622633 MAML3Q96JK9 1138 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 FAM129AQ9BZQ8 928 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 TRIM33Q9UPN9 1127 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 ALG6Q9Y672 507 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 GOLGB1Q14789 3259 aaKnown RBP13.2□□□□□ -0.3
LITAF-221ENST00000622633 UBE4BO95155 1302 aa13.2□□□□□ -0.3
LITAF-221ENST00000622633 KIF13BQ9NQT8 1826 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 FTLP02792 175 aaPredicted RBP13.19□□□□□ -0.3
LITAF-221ENST00000622633 SHBGP04278 402 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 VDRP11473 427 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 PORP16435 677 aaPredicted RBP13.19□□□□□ -0.3
LITAF-221ENST00000622633 DMPKQ09013 629 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 TTLL12Q14166 644 aaPredicted RBP13.19□□□□□ -0.3
LITAF-221ENST00000622633 RCN2Q14257 317 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 AGBL2Q5U5Z8 902 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 ZNF746Q6NUN9 644 aaPredicted RBP13.19□□□□□ -0.3
LITAF-221ENST00000622633 FMO2Q99518 471 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 TEKT3Q9BXF9 490 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms