RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 UBE2TQ9NPD8 197 aaPredicted RBP19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 IL23AQ9NPF7 189 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 FBXL5Q9UKA1 691 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 DNAJC12Q9UKB3 198 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 AJAP1Q9UKB5 411 aaPredicted RBP19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 AGAP1Q9UPQ3 857 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 ASS1P00966 412 aaKnown RBP19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 POMCP01189 267 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 CYP3A5P20815 502 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 RFX1P22670 979 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 SOX4Q06945 474 aaPredicted RBP19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 PPIGQ13427 754 aaKnown RBP eCLIP19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 ZNF699Q32M78 642 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 CLLU1OSQ5K130 101 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 TC2NQ8N9U0 490 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 TATDN2Q93075 761 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 GOLGA2P5Q9HBQ8 144 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 RNF216Q9NWF9 866 aaPredicted RBP19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 DAAM1Q9Y4D1 1078 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 ABHD14A-ACY1A0A1B0GW23 586 aa19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 FPGSQ05932 587 aa19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 GRIK3Q13003 919 aa19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 NPAS4Q8IUM7 802 aa19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 URGCPQ8TCY9 931 aa19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 BAP1Q92560 729 aa19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 SPAG5Q96R06 1193 aa19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 NAA15Q9BXJ9 866 aaKnown RBP19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 XYLT2Q9H1B5 865 aa19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 APOBEC3GQ9HC16 384 aaKnown RBP19.16■□□□□ 0.66
PTCHD3-202ENST00000622555 INPPL1O15357 1258 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 SYN1P17600 705 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 ATICP31939 592 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 ARHGAP44Q17R89 818 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 NOMO2Q5JPE7 1267 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 C9orf57Q5W0N0 161 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 PDXDC1Q6P996 788 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 ABI1Q8IZP0 508 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 TAF4BQ92750 862 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 DPF3Q92784 378 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 HPDLQ96IR7 371 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 NUB1Q9Y5A7 615 aa19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.15■□□□□ 0.66
PTCHD3-202ENST00000622555 LRRC53A6NM62 1247 aa19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 PPEF2O14830 753 aa19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 MFAP3P55082 362 aa19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 NAB2Q15742 525 aa19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 TSR1Q2NL82 804 aaKnown RBP19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 TNS4Q8IZW8 715 aa19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 OR8K1Q8NGG5 319 aa19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 KAT5Q92993 513 aa19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 STK33Q9BYT3 514 aa19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 ABHD10Q9NUJ1 306 aa19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 ZMYND8Q9ULU4 1186 aaPredicted RBP19.14■□□□□ 0.66
PTCHD3-202ENST00000622555 FNDC1Q4ZHG4 1894 aaPredicted RBP19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 ANO9A1A5B4 782 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 HOXA2O43364 376 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 EFCAB14O75071 495 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 GCNT1Q02742 428 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 MYO1EQ12965 1108 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 DRAP1Q14919 205 aaPredicted RBP19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 ZNF667Q5HYK9 610 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 FAM81BQ96LP2 452 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 KREMEN1Q96MU8 473 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 PANX2Q96RD6 677 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 DNAJC7Q99615 494 aa19.14■□□□□ 0.65
PTCHD3-202ENST00000622555 PIRO00625 290 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 UPP2O95045 317 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 AMHP03971 560 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 LRPAP1P30533 357 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 GATMP50440 423 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 JAM2P57087 298 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 WDR72Q3MJ13 1102 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 LRRC8AQ8IWT6 810 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 CRIPAKQ8N1N5 446 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 LRRC52Q8N7C0 313 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 ZNF560Q96MR9 790 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 NIF3L1Q9GZT8 377 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 NUCKS1Q9H1E3 243 aaKnown RBP19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 KANSL3Q9P2N6 904 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 CACNG4Q9UBN1 327 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 NXF1Q9UBU9 619 aaKnown RBP19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 MYO6Q9UM54 1294 aa19.13■□□□□ 0.65
PTCHD3-202ENST00000622555 CASTOR2A6NHX0 329 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 F8VZ95 297 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 BAIAP3O94812 1187 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 TBXAS1P24557 533 aaPredicted RBP19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 RNASELQ05823 741 aaKnown RBP19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 TUSC3Q13454 348 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 CUL2Q13617 745 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 SFMBT2Q5VUG0 894 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 C16orf59Q7L2K0 433 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 ENOSF1Q7L5Y1 443 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 OTOP2Q7RTS6 562 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 GPIHBP1Q8IV16 184 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 ARID3AQ99856 593 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 VRTNQ9H8Y1 702 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 TBC1D13Q9NVG8 400 aa19.12■□□□□ 0.65
PTCHD3-202ENST00000622555 STAU1O95793 577 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms