RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 SIX4Q9UIU6 781 aa18.87■□□□□ 0.61
SLC6A6-209ENST00000622176 ADAM28Q9UKQ2 775 aa18.87■□□□□ 0.61
SLC6A6-209ENST00000622176 NFE2L3Q9Y4A8 694 aa18.87■□□□□ 0.61
SLC6A6-209ENST00000622176 TADA2AO75478 443 aa18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 C4BPAP04003 597 aaKnown RBP18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 TRIM49P0CI25 452 aa18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 TRIM49CP0CI26 452 aa18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 MYL5Q02045 173 aa18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 GRIN2CQ14957 1233 aa18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 DDX53Q86TM3 631 aaKnown RBP18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 GUCD1Q96NT3 240 aa18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 VN1R3Q9BXE9 311 aa18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 STK39Q9UEW8 545 aa18.86■□□□□ 0.61
SLC6A6-209ENST00000622176 PPEF2O14830 753 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 GRM6O15303 877 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 STX10O60499 249 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 LPXNO60711 386 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 CAVIN2O95810 425 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 ITGB3P05106 788 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 PAX3P23760 479 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 POLR2BP30876 1174 aaKnown RBP18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 RBP5P82980 135 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 PPP3CAQ08209 521 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 NCAPHQ15003 741 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 ZACNQ401N2 412 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 SCARA3Q6AZY7 606 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 C15orf39Q6ZRI6 1047 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 SV2AQ7L0J3 742 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 FAM114A1Q8IWE2 563 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 TRIM59Q8IWR1 403 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 RNF168Q8IYW5 571 aaPredicted RBP18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 SLC35C1Q96A29 364 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 CNOT6LQ96LI5 555 aaKnown RBP18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 ALG13Q9NP73 1137 aaKnown RBP18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 PUF60Q9UHX1 559 aaKnown RBP18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 AGAP1Q9UPQ3 857 aa18.85■□□□□ 0.61
SLC6A6-209ENST00000622176 TRANK1O15050 2925 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 SF3B1O75533 1304 aaKnown RBP eCLIP18.84■□□□□ 0.613e-6■■■■■ 61.6
SLC6A6-209ENST00000622176 RFXAPO00287 272 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 AARSP49588 968 aaKnown RBP eCLIP18.84■□□□□ 0.614e-6■■■■■ 30.6
SLC6A6-209ENST00000622176 ZNF165P49910 485 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 LILRA4P59901 499 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 ELAVL2Q12926 359 aaKnown RBP18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 TDRD10Q5VZ19 366 aaKnown RBP18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 FUT10Q6P4F1 479 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 LRRC52Q8N7C0 313 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 HASPINQ8TF76 798 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 GDPD5Q8WTR4 605 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 GPR62Q9BZJ7 368 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 LMAN2LQ9H0V9 348 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 PRDM12Q9H4Q4 367 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 TMEM8AQ9HCN3 771 aa18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 SAMSN1Q9NSI8 373 aaKnown RBP18.84■□□□□ 0.61
SLC6A6-209ENST00000622176 TRAPPC3O43617 180 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 KRT19P08727 400 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 DNAJB1P25685 340 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 PNPLA4P41247 253 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 GCLMP48507 274 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 BIRC3Q13489 604 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 CAMK1Q14012 370 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 DCAF17Q5H9S7 520 aaPredicted RBP18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 CDKAL1Q5VV42 579 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 TCERG1LQ5VWI1 586 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 POF1BQ8WVV4 589 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 SUSD3Q96L08 255 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 ZNF560Q96MR9 790 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 FANCLQ9NW38 375 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 MAGEC2Q9UBF1 373 aaPredicted RBP18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 NUB1Q9Y5A7 615 aa18.83■□□□□ 0.6
SLC6A6-209ENST00000622176 SPTLC1O15269 473 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 PHACTR2O75167 634 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 VNN1O95497 513 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 CST3P01034 146 aaPredicted RBP18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 SOD2P04179 222 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 BRCC3P46736 316 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 TAF6P49848 677 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 ZNF445P59923 1031 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 NCOA4Q13772 614 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 TIGD5Q53EQ6 642 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 KRT39Q6A163 491 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 LRSAM1Q6UWE0 723 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 TAS1R1Q7RTX1 841 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 DHX40Q8IX18 779 aaKnown RBP18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 VPS52Q8N1B4 723 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 AOPEPQ8N6M6 819 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 HERC2P3Q9BVR0 1158 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 CHST7Q9NS84 486 aa18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 R3HCC1Q9Y3T6 440 aaKnown RBP18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.82■□□□□ 0.6
SLC6A6-209ENST00000622176 SCN1AP35498 2009 aa18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 MYO7AQ13402 2215 aa18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 SMTNL1A8MU46 457 aa18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 M0QZQ0 153 aa18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 FSCN2O14926 492 aa18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 PMM2O15305 246 aa18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 STAU1O95793 577 aaKnown RBP18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 CTSAP10619 480 aa18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 POU3F3P20264 500 aaPredicted RBP18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 FGFR3P22607 806 aa18.81■□□□□ 0.6
SLC6A6-209ENST00000622176 EEF1GP26641 437 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms