RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ZNF398Q8TD17 642 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 EPS8L3Q8TE67 593 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 SYN2Q92777 582 aaPredicted RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 HAS1Q92839 578 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 CDK5RAP3Q96JB5 506 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 ZFRQ96KR1 1074 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 SERPINB12Q96P63 405 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 FNBP1Q96RU3 617 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 HGH1Q9BTY7 390 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 LSM14BQ9BX40 385 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 PACSIN1Q9BY11 444 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 TANGO6Q9C0B7 1094 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 NT5C3AQ9H0P0 336 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 RBM38Q9H0Z9 239 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 TPK1Q9H3S4 243 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 PLGRKTQ9HBL7 147 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 MTRF1LQ9UGC7 380 aaKnown RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 AMACRQ9UHK6 382 aa7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 FAF1Q9UNN5 650 aaPredicted RBP7.94□□□□□ -1.14
TRIM49B-202ENST00000622138 MAGEB2O15479 319 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 UFL1O94874 794 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ZBTB48P10074 688 aaPredicted RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 HSPA8P11142 646 aaKnown RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 PTPN2P17706 415 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 NT5C2P49902 561 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ASPHQ12797 758 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 MED21Q13503 144 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 DHX34Q14147 1143 aaKnown RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 SLC29A2Q14542 456 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 LRRC14Q15048 493 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 TDRD12Q587J7 1177 aaKnown RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 SLC45A4Q5BKX6 768 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 FAM182BQ5T319 152 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 IL23RQ5VWK5 629 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 TTBK2Q6IQ55 1244 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ZNF449Q6P9G9 518 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 KLHDC10Q6PID8 442 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 DSTYKQ6XUX3 929 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ZNF804AQ7Z570 1209 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ADGRG6Q86SQ4 1221 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 CCDC84Q86UT8 332 aaPredicted RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 MGARPQ8TDB4 240 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 STARD8Q92502 1023 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 HSPBAP1Q96EW2 488 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 CADM1Q9BY67 442 aaKnown RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 PITPNM3Q9BZ71 974 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 FHDC1Q9C0D6 1143 aaPredicted RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 GBA3Q9H227 469 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 CD209Q9NNX6 404 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 EMILIN3Q9NT22 766 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 PACSIN2Q9UNF0 486 aaPredicted RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 TDRKHQ9Y2W6 561 aaKnown RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 RPTORQ8N122 1335 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ADAMTSL1Q8N6G6 1762 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 FOCADQ5VW36 1801 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 OXSR1O95747 527 aaPredicted RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 CYP2C9P11712 490 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 COL6A2P12110 1019 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 POLR2EP19388 210 aaKnown RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 TAC1P20366 129 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 KLRC1P26715 233 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ORC2Q13416 577 aaPredicted RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 CLUL1Q15846 466 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ZNF423Q2M1K9 1284 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 TMEM266Q2M3C6 531 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 SLC9C1Q4G0N8 1177 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 FAM83BQ5T0W9 1011 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 C10orf76Q5T2E6 689 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 GJC2Q5T442 439 aaPredicted RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 RBM44Q6ZP01 1051 aaKnown RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 RGS9BPQ6ZS82 235 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 DNAAF5Q86Y56 855 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 PALB2Q86YC2 1186 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 SKA1Q96BD8 255 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 COX4I2Q96KJ9 171 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 PPP1R10Q96QC0 940 aaKnown RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 MIPEPQ99797 713 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ERP44Q9BS26 406 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 BTBD10Q9BSF8 475 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 RNF39Q9H2S5 420 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 METTL5Q9NRN9 209 aaKnown RBP7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ATAD3AQ9NVI7 634 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 NDE1Q9NXR1 346 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ZFP69BQ9UJL9 534 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 PCDHA2Q9Y5H9 948 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 COL4A3BPQ9Y5P4 624 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ACTL7BQ9Y614 415 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 ADGRA3Q8IWK6 1321 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 PLIN4Q96Q06 1357 aa7.93□□□□□ -1.14
TRIM49B-202ENST00000622138 GAKO14976 1311 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 A0A088AWK7 358 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 IGKV6D-41A0A0C4DH26 115 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 E9PMD0 336 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 RIPK2O43353 540 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 ZNF862O60290 1169 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 PHF2O75151 1096 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 SERPING1P05155 500 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 LDHCP07864 332 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 SMIM18P0DKX4 95 aa7.92□□□□□ -1.14
TRIM49B-202ENST00000622138 ENDOUP21128 410 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms