RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	HSPA1L	P34931	641 aa		18.85	■□□□□ 0.61
CDK16-223	ENST00000622098	PIK3CA	P42336	1068 aa		18.85	■□□□□ 0.61
CDK16-223	ENST00000622098	SWSAP1	Q6NVH7	229 aa		18.85	■□□□□ 0.61
CDK16-223	ENST00000622098	GSTA5	Q7RTV2	222 aa		18.85	■□□□□ 0.61
CDK16-223	ENST00000622098	ANKS1B	Q7Z6G8	1248 aa		18.85	■□□□□ 0.61
CDK16-223	ENST00000622098	RHOT1	Q8IXI2	618 aa		18.85	■□□□□ 0.61
CDK16-223	ENST00000622098	CCDC89	Q8N998	374 aa		18.85	■□□□□ 0.61
CDK16-223	ENST00000622098	SEPT9	Q9UHD8	586 aa	Predicted RBP	18.85	■□□□□ 0.61
CDK16-223	ENST00000622098	PGAP2	Q9UHJ9	254 aa		18.85	■□□□□ 0.61
CDK16-223	ENST00000622098	FDX1	P10109	184 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	EZR	P15311	586 aa	Known RBP	18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	ACOT2	P49753	483 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	KCNJ2	P63252	427 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	CCNG2	Q16589	344 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	TDRD10	Q5VZ19	366 aa	Known RBP	18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	SPATA21	Q7Z572	469 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	XPNPEP1	Q9NQW7	623 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	KLHL11	Q9NVR0	708 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	ADAM22	Q9P0K1	906 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	MCM8	Q9UJA3	840 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	HGS	O14964	777 aa	Predicted RBP	18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	CDH16	O75309	829 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	GJB6	O95452	261 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	LIG4	P49917	911 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	BPIFB4	P59827	614 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	CYP4F22	Q6NT55	531 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	GIMAP7	Q8NHV1	300 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	ECT2	Q9H8V3	914 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	CFAP73	A6NFT4	308 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	PSTPIP1	O43586	416 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	TCEA3	O75764	348 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	NLRP11	P59045	1033 aa	Known RBP	18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	NCALD	P61601	193 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	MAMLD1	Q13495	774 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	BAAT	Q14032	418 aa	Predicted RBP	18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	ZACN	Q401N2	412 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	LIN9	Q5TKA1	542 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	TMEM270	Q6UE05	265 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.84	■□□□□ 0.61	3e-6	■■■■■ 37.6
CDK16-223	ENST00000622098	ATP6V0A1	Q93050	837 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	RIPK3	Q9Y572	518 aa		18.84	■□□□□ 0.61
CDK16-223	ENST00000622098	EXTL3	O43909	919 aa		18.83	■□□□□ 0.61
CDK16-223	ENST00000622098	PTP4A2	Q12974	167 aa		18.83	■□□□□ 0.61
CDK16-223	ENST00000622098	WNK4	Q96J92	1243 aa		18.83	■□□□□ 0.61
CDK16-223	ENST00000622098	IFT74	Q96LB3	600 aa		18.83	■□□□□ 0.61
CDK16-223	ENST00000622098	KIAA1683	Q9H0B3	1180 aa		18.83	■□□□□ 0.61
CDK16-223	ENST00000622098	NKIRAS1	Q9NYS0	192 aa		18.83	■□□□□ 0.61
CDK16-223	ENST00000622098	PTPRJ	Q12913	1337 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	LOC102724159	A0A0B4J2E5	919 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	DGAT1	O75907	488 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	STBD1	O95210	358 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	NF2	P35240	595 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	PWP2	Q15269	919 aa	Known RBP	18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	P3H1	Q32P28	736 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	ARHGEF18	Q6ZSZ5	1173 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	MCPH1	Q8NEM0	835 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	RBM15	Q96T37	977 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	POLR3F	Q9H1D9	316 aa	Predicted RBP	18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	CXorf56	Q9H5V9	222 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	ARL2BP	Q9Y2Y0	163 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	PCDHB4	Q9Y5E5	795 aa		18.83	■□□□□ 0.6
CDK16-223	ENST00000622098	WNT10B	O00744	389 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	NR3C2	P08235	984 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	MAP3K10	Q02779	954 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	MTMR2	Q13614	643 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	GALNTL6	Q49A17	601 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	ZFYVE27	Q5T4F4	411 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	KAZN	Q674X7	775 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	KATNAL2	Q8IYT4	538 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	RDM1	Q8NG50	284 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	CCDC77	Q9BR77	488 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	ARHGAP28	Q9P2N2	729 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	LGALS13	Q9UHV8	139 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	TLR3	O15455	904 aa	Known RBP	18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	ACO1	P21399	889 aa	Known RBP	18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	GNA15	P30679	374 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	NOMO3	P69849	1222 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	TMED2	Q15363	201 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	TMEM63B	Q5T3F8	832 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	VSIG10L	Q86VR7	867 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	BBOF1	Q8ND07	529 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	MRPL47	Q9HD33	250 aa	Known RBP	18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	PNMA3	Q9UL41	463 aa		18.82	■□□□□ 0.6
CDK16-223	ENST00000622098	RASA4B	C9J798	803 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	PI4K2B	G5E9Z4	385 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	RASA4	O43374	803 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	ZBED4	O75132	1171 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	C4BPA	P04003	597 aa	Known RBP	18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	NQO1	P15559	274 aa	Known RBP	18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	PRKCE	Q02156	737 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	PSMD6	Q15008	389 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	ATP13A4	Q4VNC1	1196 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	KIF2B	Q8N4N8	673 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	FITM2	Q8N6M3	262 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	FAM212A	Q96EL1	285 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	ATP6V0A4	Q9HBG4	840 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	APOBEC3G	Q9HC16	384 aa	Known RBP	18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms