RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TESPA1A2RU30 521 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-211ENST00000622020 FAM47DPA6NHR8 397 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 HNRNPDLO14979 420 aaKnown RBP16.74■□□□□ 0.27
NPHP4-211ENST00000622020 UNC5CO95185 931 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 FDX1P10109 184 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 NPTX2P47972 431 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 TAF11Q15544 211 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 SYCP2LQ5T4T6 812 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 PCNX4Q63HM2 1172 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 SCARA3Q6AZY7 606 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 ASRGL1Q7L266 308 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 BSNDQ8WZ55 320 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 OSBPL8Q9BZF1 889 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 SAE1Q9UBE0 346 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-211ENST00000622020 CHKBQ9Y259 395 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 TELO2Q9Y4R8 837 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 DHX15O43143 795 aaKnown RBP16.73■□□□□ 0.27
NPHP4-211ENST00000622020 PDHA1P08559 390 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 TNNI1P19237 187 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 EPHB2P29323 1055 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 GTF2BQ00403 316 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 SATB1Q01826 763 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 MTMR1Q13613 665 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 SETDB1Q15047 1291 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 LRRC37BQ96QE4 947 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 DNPEPQ9ULA0 475 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 TAF1LQ8IZX4 1826 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 P4HA2O15460 535 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 DSG3P32926 999 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 ACOT2P49753 483 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 CCNHP51946 323 aaPredicted RBP16.73■□□□□ 0.27
NPHP4-211ENST00000622020 SEZ6Q53EL9 994 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 ZBED8Q8IZ13 594 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 EHMT1Q9H9B1 1298 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 KMT5AQ9NQR1 393 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 NEU2Q9Y3R4 380 aa16.73■□□□□ 0.27
NPHP4-211ENST00000622020 ENO4A6NNW6 628 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 DYNLT1P63172 113 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 GAD2Q05329 585 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 GPS1Q13098 491 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 B3GNT9Q6UX72 402 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 ANKRD35Q8N283 1001 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 CCHCR1Q8TD31 782 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 GRK7Q8WTQ7 553 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 C7orf43Q8WVR3 580 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 TRABDQ9H4I3 376 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 KIAA1586Q9HCI6 787 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 TMEM8AQ9HCN3 771 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 ENTPD5O75356 428 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 WNT7BP56706 349 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 MRPS9P82933 396 aaKnown RBP16.72■□□□□ 0.27
NPHP4-211ENST00000622020 SLC1A5Q15758 541 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 TMEM270Q6UE05 265 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 TTC8Q8TAM2 541 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 SLC5A4Q9NY91 659 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 HARSP12081 509 aaKnown RBP16.72■□□□□ 0.27
NPHP4-211ENST00000622020 ALADP13716 330 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 GM2AP17900 193 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 ARSEP51690 589 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 RPL7AP62424 266 aaKnown RBP16.72■□□□□ 0.27
NPHP4-211ENST00000622020 EFTUD2Q15029 972 aaKnown RBP eCLIP16.72■□□□□ 0.27
NPHP4-211ENST00000622020 TKFCQ3LXA3 575 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 ZNF394Q53GI3 561 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 SLC39A4Q6P5W5 647 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 CCDC89Q8N998 374 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 YIPF3Q9GZM5 350 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 RAVER2Q9HCJ3 691 aaKnown RBP16.72■□□□□ 0.27
NPHP4-211ENST00000622020 NPHS2Q9NP85 383 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 TMX2Q9Y320 296 aa16.72■□□□□ 0.27
NPHP4-211ENST00000622020 ASTN2O75129 1339 aaPredicted RBP16.71■□□□□ 0.27
NPHP4-211ENST00000622020 TLR3O15455 904 aaKnown RBP16.71■□□□□ 0.27
NPHP4-211ENST00000622020 FGFR1P11362 822 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 UNGP13051 313 aaPredicted RBP16.71■□□□□ 0.27
NPHP4-211ENST00000622020 NPR1P16066 1061 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 PECAM1P16284 738 aaPredicted RBP16.71■□□□□ 0.27
NPHP4-211ENST00000622020 RAD23BP54727 409 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 STRIP1Q5VSL9 837 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 LONP2Q86WA8 852 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 TAAR1Q96RJ0 339 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 RIT2Q99578 217 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 C1orf112Q9NSG2 853 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 DMP1Q13316 513 aaPredicted RBP16.71■□□□□ 0.27
NPHP4-211ENST00000622020 TCEAL1Q15170 157 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 PPP1R21Q6ZMI0 780 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 ZNF516Q92618 1163 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 PLCD4Q9BRC7 762 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 KCNG1Q9UIX4 513 aa16.71■□□□□ 0.27
NPHP4-211ENST00000622020 MYPNQ86TC9 1320 aa16.71■□□□□ 0.26
NPHP4-211ENST00000622020 GCAP28676 217 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 ABL2P42684 1182 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 GPC3P51654 580 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 MYBPC2Q14324 1141 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 CC2D2BQ6DHV5 1058 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 LRRC8CQ8TDW0 803 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 MAML1Q92585 1016 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 TMEM121Q9BTD3 319 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 RANBP17Q9H2T7 1088 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms