RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 STYXL1Q9Y6J8 313 aa27.4■■□□□ 1.98
VEGFA-229ENST00000621747 ZFP37Q9Y6Q3 630 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-229ENST00000621747 A0A087X0B3 334 aa27.39■■□□□ 1.98
VEGFA-229ENST00000621747 TBC1D4O60343 1298 aa27.39■■□□□ 1.98
VEGFA-229ENST00000621747 PPP1R37O75864 691 aa27.39■■□□□ 1.98
VEGFA-229ENST00000621747 ZSCAN22P10073 491 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-229ENST00000621747 ELF1P32519 619 aa27.39■■□□□ 1.98
VEGFA-229ENST00000621747 CTXN3Q4LDR2 81 aa27.39■■□□□ 1.98
VEGFA-229ENST00000621747 FOXD4L5Q5VV16 416 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-229ENST00000621747 PDILTQ8N807 584 aa27.39■■□□□ 1.98
VEGFA-229ENST00000621747 FOXD4L4Q8WXT5 416 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-229ENST00000621747 OLFML3Q9NRN5 406 aa27.39■■□□□ 1.98
VEGFA-229ENST00000621747 DUSP12Q9UNI6 340 aa27.39■■□□□ 1.98
VEGFA-229ENST00000621747 DERAQ9Y315 318 aa27.39■■□□□ 1.98
VEGFA-229ENST00000621747 ARPP19P56211 112 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 POSTNQ15063 836 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 SPATA1Q5VX52 437 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 POMGNT1Q8WZA1 660 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 ACCSQ96QU6 501 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 PRRX2Q99811 253 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 STRA6Q9BX79 667 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 LRRC27Q9C0I9 530 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 TBC1D7Q9P0N9 293 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 FBXL5Q9UKA1 691 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 PCDHB13Q9Y5F0 798 aa27.38■■□□□ 1.97
VEGFA-229ENST00000621747 WDR27A2RRH5 827 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 TISP43B9A030 160 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 M0QZQ0 153 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 CUTAO60888 179 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 ABLIM3O94929 683 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 GCNT3O95395 438 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 LAMP2P13473 410 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 ACOT2P49753 483 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 POU5F1Q01860 360 aaKnown RBP27.37■■□□□ 1.97
VEGFA-229ENST00000621747 ALCAMQ13740 583 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 TMEM132DQ14C87 1099 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 L1TD1Q5T7N2 865 aaKnown RBP27.37■■□□□ 1.97
VEGFA-229ENST00000621747 JADE1Q6IE81 842 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 CUEDC2Q9H467 287 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 ASB7Q9H672 318 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 PANK4Q9NVE7 773 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 MYH15Q9Y2K3 1946 aa27.37■■□□□ 1.97
VEGFA-229ENST00000621747 MYO10Q9HD67 2058 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 FRMD3A2A2Y4 597 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 PRRG1O14668 218 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 F13A1P00488 732 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 PDGFBP01127 241 aaPredicted RBP27.36■■□□□ 1.97
VEGFA-229ENST00000621747 ATF2P15336 505 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 AARSP49588 968 aaKnown RBP eCLIP27.36■■□□□ 1.971e-6■■■■□ 20.6
VEGFA-229ENST00000621747 GUCY2FP51841 1108 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 NTHL1P78549 312 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 TPGS2Q68CL5 300 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 CCDC65Q8IXS2 484 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 OXCT2Q9BYC2 517 aaPredicted RBP27.36■■□□□ 1.97
VEGFA-229ENST00000621747 TNMDQ9H2S6 317 aa27.36■■□□□ 1.97
VEGFA-229ENST00000621747 ARHGEF37A1IGU5 675 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 LRG1P02750 347 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 PAX3P23760 479 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 AVPR2P30518 371 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 YWHAHQ04917 246 aaPredicted RBP27.35■■□□□ 1.97
VEGFA-229ENST00000621747 DSTYKQ6XUX3 929 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 TMEM130Q8N3G9 435 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 KCNG4Q8TDN1 519 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 RSAD2Q8WXG1 361 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 MFSD1Q9H3U5 465 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 CYP4F11Q9HBI6 524 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 CDH7Q9ULB5 785 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 C2CD2Q9Y426 696 aa27.35■■□□□ 1.97
VEGFA-229ENST00000621747 NFICP08651 508 aa27.34■■□□□ 1.97
VEGFA-229ENST00000621747 VCPP55072 806 aaKnown RBP27.34■■□□□ 1.97
VEGFA-229ENST00000621747 FOXD4L6Q3SYB3 417 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-229ENST00000621747 PABPC1LQ4VXU2 614 aaKnown RBP27.34■■□□□ 1.97
VEGFA-229ENST00000621747 ATL3Q6DD88 541 aa27.34■■□□□ 1.97
VEGFA-229ENST00000621747 FOXD4L3Q6VB84 417 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-229ENST00000621747 USP37Q86T82 979 aa27.34■■□□□ 1.97
VEGFA-229ENST00000621747 TCEAL8Q8IYN2 117 aa27.34■■□□□ 1.97
VEGFA-229ENST00000621747 SYCP3Q8IZU3 236 aa27.34■■□□□ 1.97
VEGFA-229ENST00000621747 FBXL21Q9UKT6 434 aa27.34■■□□□ 1.97
VEGFA-229ENST00000621747 MAFFQ9ULX9 164 aa27.34■■□□□ 1.97
VEGFA-229ENST00000621747 OAZ2O95190 189 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 CPB1P15086 417 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 ADSSP30520 456 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 AMPD3Q01432 767 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 KCNA1Q09470 495 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 IER5LQ5T953 404 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 SLC44A3Q8N4M1 653 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 IKZF4Q9H2S9 585 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 HCFC1R1Q9NWW0 138 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 DNMT3BQ9UBC3 853 aaKnown RBP27.33■■□□□ 1.97
VEGFA-229ENST00000621747 KCNH3Q9ULD8 1083 aa27.33■■□□□ 1.97
VEGFA-229ENST00000621747 ANHXE9PGG2 379 aa27.32■■□□□ 1.96
VEGFA-229ENST00000621747 IL18RAPO95256 599 aa27.32■■□□□ 1.96
VEGFA-229ENST00000621747 CASP5P51878 434 aa27.32■■□□□ 1.96
VEGFA-229ENST00000621747 LILRA4P59901 499 aa27.32■■□□□ 1.96
VEGFA-229ENST00000621747 HTR4Q13639 388 aa27.32■■□□□ 1.96
VEGFA-229ENST00000621747 E2F4Q16254 413 aa27.32■■□□□ 1.96
VEGFA-229ENST00000621747 C9orf57Q5W0N0 161 aa27.32■■□□□ 1.96
VEGFA-229ENST00000621747 IQUBQ8NA54 791 aa27.32■■□□□ 1.96
VEGFA-229ENST00000621747 SPRYD3Q8NCJ5 442 aa27.32■■□□□ 1.96
VEGFA-229ENST00000621747 FGF13Q92913 245 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms