RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SIX4Q9UIU6 781 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 CTNND2Q9UQB3 1225 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 LRRIQ3A6PVS8 624 aaPredicted RBP15.48■□□□□ 0.07
CBWD3-217ENST00000621474 MAPK13O15264 365 aa15.48■□□□□ 0.07
CBWD3-217ENST00000621474 DLATP10515 647 aaKnown RBP15.48■□□□□ 0.07
CBWD3-217ENST00000621474 PPP1R2P41236 205 aa15.48■□□□□ 0.07
CBWD3-217ENST00000621474 DSG1Q02413 1049 aa15.48■□□□□ 0.07
CBWD3-217ENST00000621474 FOXR2Q6PJQ5 311 aa15.48■□□□□ 0.07
CBWD3-217ENST00000621474 WDR49Q8IV35 697 aa15.48■□□□□ 0.07
CBWD3-217ENST00000621474 MRPL43Q8N983 215 aaKnown RBP15.48■□□□□ 0.07
CBWD3-217ENST00000621474 MAFAQ8NHW3 353 aaPredicted RBP15.48■□□□□ 0.07
CBWD3-217ENST00000621474 NELFBQ8WX92 580 aa15.48■□□□□ 0.07
CBWD3-217ENST00000621474 CGRRF1Q99675 332 aa15.48■□□□□ 0.07
CBWD3-217ENST00000621474 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.48■□□□□ 0.07
CBWD3-217ENST00000621474 ITGB3P05106 788 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 FGFR3P22607 806 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 LILRA4P59901 499 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 FKBP3Q00688 224 aaKnown RBP15.47■□□□□ 0.07
CBWD3-217ENST00000621474 HYAL1Q12794 435 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 STIM1Q13586 685 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 SMC1AQ14683 1233 aaKnown RBP15.47■□□□□ 0.07
CBWD3-217ENST00000621474 COL19A1Q14993 1142 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 SURF1Q15526 300 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 FAM171A1Q5VUB5 890 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 PDE12Q6L8Q7 609 aaKnown RBP15.47■□□□□ 0.07
CBWD3-217ENST00000621474 MICAL1Q8TDZ2 1067 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 STK39Q9UEW8 545 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 FRMD4BQ9Y2L6 1034 aa15.47■□□□□ 0.07
CBWD3-217ENST00000621474 PER2O15055 1255 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 RPL13P26373 211 aaKnown RBP15.46■□□□□ 0.07
CBWD3-217ENST00000621474 TKTP29401 623 aaKnown RBP15.46■□□□□ 0.07
CBWD3-217ENST00000621474 GLUD2P49448 558 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 STX17P56962 302 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 PAK1Q13153 545 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 KCNC3Q14003 757 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 USP41Q3LFD5 358 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 CCDC183Q5T5S1 534 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 RBM23Q86U06 439 aaKnown RBP15.46■□□□□ 0.07
CBWD3-217ENST00000621474 PPM1EQ8WY54 764 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 SUSD3Q96L08 255 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 FNBP1Q96RU3 617 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 MKNK1Q9BUB5 465 aa15.46■□□□□ 0.07
CBWD3-217ENST00000621474 MTCL1Q9Y4B5 1905 aaKnown RBP15.46■□□□□ 0.07
CBWD3-217ENST00000621474 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.46■□□□□ 0.06
CBWD3-217ENST00000621474 M0QZQ0 153 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 C2CD2LO14523 706 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 CXCL14O95715 111 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 TMEM191BP0C7N4 346 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 TNNI1P19237 187 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 POLR2BP30876 1174 aaKnown RBP15.46■□□□□ 0.06
CBWD3-217ENST00000621474 PSMC2P35998 433 aaKnown RBP15.46■□□□□ 0.06
CBWD3-217ENST00000621474 NLRP12P59046 1061 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 RBM10P98175 930 aaKnown RBP15.46■□□□□ 0.06
CBWD3-217ENST00000621474 ELAVL2Q12926 359 aaKnown RBP15.46■□□□□ 0.06
CBWD3-217ENST00000621474 BFSP1Q12934 665 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 DUOXA2Q1HG44 320 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 KLHL40Q2TBA0 621 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.46■□□□□ 0.06
CBWD3-217ENST00000621474 TRAPPC11Q7Z392 1133 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 FAM186BQ8IYM0 893 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 MLKLQ8NB16 471 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 VN1R2Q8NFZ6 395 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 LNX1Q8TBB1 728 aaPredicted RBP15.46■□□□□ 0.06
CBWD3-217ENST00000621474 TMC2Q8TDI7 906 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 CACTINQ8WUQ7 758 aaKnown RBP15.46■□□□□ 0.06
CBWD3-217ENST00000621474 ANKRD36BP1Q96IX9 119 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 TSG101Q99816 390 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 TTPALQ9BTX7 342 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 ITGA11Q9UKX5 1188 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 NUB1Q9Y5A7 615 aa15.46■□□□□ 0.06
CBWD3-217ENST00000621474 MUC3AQ02505 3323 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 TULP1O00294 542 aaPredicted RBP15.45■□□□□ 0.06
CBWD3-217ENST00000621474 CETN3O15182 167 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 GLP2RO95838 553 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 CST3P01034 146 aaPredicted RBP15.45■□□□□ 0.06
CBWD3-217ENST00000621474 C4BPAP04003 597 aaKnown RBP15.45■□□□□ 0.06
CBWD3-217ENST00000621474 URODP06132 367 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 CNPP09543 421 aaKnown RBP15.45■□□□□ 0.06
CBWD3-217ENST00000621474 NRIP1P48552 1158 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 DUSP6Q16828 381 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 CTC1Q2NKJ3 1217 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 TDRD10Q5VZ19 366 aaKnown RBP15.45■□□□□ 0.06
CBWD3-217ENST00000621474 CAVIN1Q6NZI2 390 aaKnown RBP15.45■□□□□ 0.06
CBWD3-217ENST00000621474 PRSS55Q6UWB4 352 aaPredicted RBP15.45■□□□□ 0.06
CBWD3-217ENST00000621474 C15orf39Q6ZRI6 1047 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 INTS8Q75QN2 995 aaKnown RBP15.45■□□□□ 0.06
CBWD3-217ENST00000621474 CEP57Q86XR8 500 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 GPR65Q8IYL9 337 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 CSGALNACT2Q8N6G5 542 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 PIK3R5Q8WYR1 880 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 RXFP1Q9HBX9 757 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 PRDM6Q9NQX0 595 aa15.45■□□□□ 0.06
CBWD3-217ENST00000621474 MRPL17Q9NRX2 175 aaKnown RBP15.45■□□□□ 0.06
CBWD3-217ENST00000621474 BICDL2A1A5D9 508 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 TEX28O15482 410 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 LINC01565O15544 149 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 TRAPPC3O43617 180 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 TRIM49P0CI25 452 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 TRIM49CP0CI26 452 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 RPL17P18621 184 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms