RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PPEF2O14830 753 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 ITGB3P05106 788 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 EPB41P11171 864 aaKnown RBP20.07■□□□□ 0.8
CIRBP-245ENST00000621399 BRCC3P46736 316 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 GLUD2P49448 558 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 CCDC85BQ15834 202 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-245ENST00000621399 FOXR2Q6PJQ5 311 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 INTS8Q75QN2 995 aaKnown RBP20.07■□□□□ 0.8
CIRBP-245ENST00000621399 USP37Q86T82 979 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 CEP57Q86XR8 500 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 ZC3H3Q8IXZ2 948 aaKnown RBP20.07■□□□□ 0.8
CIRBP-245ENST00000621399 CSGALNACT2Q8N6G5 542 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 MRPL43Q8N983 215 aaKnown RBP20.07■□□□□ 0.8
CIRBP-245ENST00000621399 C1orf127Q8N9H9 656 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 PLEKHO2Q8TD55 490 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 PARD3BQ8TEW8 1205 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 AUTS2Q8WXX7 1259 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 PPM1EQ8WY54 764 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 B3GALT6Q96L58 329 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 DUSP9Q99956 384 aaKnown RBP20.07■□□□□ 0.8
CIRBP-245ENST00000621399 MKNK1Q9BUB5 465 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 GZF1Q9H116 711 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-245ENST00000621399 RWDD2AQ9UIY3 292 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 ITGA11Q9UKX5 1188 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 R3HCC1Q9Y3T6 440 aaKnown RBP20.07■□□□□ 0.8
CIRBP-245ENST00000621399 MYO9BQ13459 2157 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 LRRIQ3A6PVS8 624 aaPredicted RBP20.06■□□□□ 0.8
CIRBP-245ENST00000621399 I3L4J1 428 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 C2CD2LO14523 706 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 SLC16A3O15427 465 aaKnown RBP20.06■□□□□ 0.8
CIRBP-245ENST00000621399 URODP06132 367 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 KRT19P08727 400 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 VAMP7P51809 220 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 DLG4P78352 724 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 TCEAL5Q5H9L2 206 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 TMC2Q8TDI7 906 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 PPP2R3CQ969Q6 453 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 MRPL17Q9NRX2 175 aaKnown RBP20.06■□□□□ 0.8
CIRBP-245ENST00000621399 CHST7Q9NS84 486 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 AGAP1Q9UPQ3 857 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 SSX2IPQ9Y2D8 614 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 TRIP11Q15643 1979 aa20.06■□□□□ 0.8
CIRBP-245ENST00000621399 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-245ENST00000621399 C2orf71A6NGG8 1288 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 HIDE1A8MVS5 230 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 POLR2BP30876 1174 aaKnown RBP20.05■□□□□ 0.8
CIRBP-245ENST00000621399 AP3M2P53677 418 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 CLDN10P78369 228 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 RBP5P82980 135 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 DSG1Q02413 1049 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 PTPN14Q15678 1187 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 SKOR2Q2VWA4 1001 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-245ENST00000621399 DSTYKQ6XUX3 929 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-245ENST00000621399 TRAPPC11Q7Z392 1133 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 RBM23Q86U06 439 aaKnown RBP20.05■□□□□ 0.8
CIRBP-245ENST00000621399 RIN2Q8WYP3 895 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-245ENST00000621399 ZNF516Q92618 1163 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 CEP63Q96MT8 703 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 TTPALQ9BTX7 342 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 PLXNA4Q9HCM2 1894 aa20.05■□□□□ 0.8
CIRBP-245ENST00000621399 DLL1O00548 723 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 PHACTR2O75167 634 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 PAX3P23760 479 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 PNPLA4P41247 253 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 TAF6P49848 677 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 LILRA4P59901 499 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 BFSP1Q12934 665 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 RTP2Q5QGT7 225 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 KIAA0319Q5VV43 1072 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 FILIP1Q7Z7B0 1213 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 ADGRD2Q7Z7M1 963 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 MAFAQ8NHW3 353 aaPredicted RBP20.04■□□□□ 0.8
CIRBP-245ENST00000621399 SUSD3Q96L08 255 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 TLE6Q9H808 572 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 SIX4Q9UIU6 781 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 IRAK3Q9Y616 596 aa20.04■□□□□ 0.8
CIRBP-245ENST00000621399 IKBKBO14920 756 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 PER2O15055 1255 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 SPTLC1O15269 473 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 FGFR1OPO95684 399 aaKnown RBP20.03■□□□□ 0.8
CIRBP-245ENST00000621399 FGFR3P22607 806 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 ERCC5P28715 1186 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-245ENST00000621399 TKTP29401 623 aaKnown RBP20.03■□□□□ 0.8
CIRBP-245ENST00000621399 NRIP1P48552 1158 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 ENPEPQ07075 957 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 BIRC3Q13489 604 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 SV2CQ496J9 727 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 CT47A1Q5JQC4 288 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-245ENST00000621399 SCARA3Q6AZY7 606 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 LRRC52Q8N7C0 313 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 CXorf38Q8TB03 319 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 BORCS6Q96GS4 357 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 ZNF560Q96MR9 790 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 SRRTQ9BXP5 876 aaKnown RBP20.03■□□□□ 0.8
CIRBP-245ENST00000621399 EMILIN2Q9BXX0 1053 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 IGFLR1Q9H665 355 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 ANO10Q9NW15 660 aa20.03■□□□□ 0.8
CIRBP-245ENST00000621399 ARMCX3Q9UH62 379 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-245ENST00000621399 KPNA7A9QM74 516 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms