RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 PDGFCQ9NRA1 345 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 WRAP73Q9P2S5 460 aaPredicted RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 GRIN3BO60391 1043 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 USP2O75604 605 aaPredicted RBP9.62□□□□□ -0.87
GGA3-222ENST00000621217 LSP1P33241 339 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 CLK2P49760 499 aaKnown RBP9.62□□□□□ -0.87
GGA3-222ENST00000621217 SLC29A2Q14542 456 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 AMHR2Q16671 573 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 BTNL9Q6UXG8 535 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 NLRP14Q86W24 1093 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 RSAD2Q8WXG1 361 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 GPRASP2Q96D09 838 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 HSD17B14Q9BPX1 270 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 OLFML3Q9NRN5 406 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 KLK14Q9P0G3 267 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 VAV3Q9UKW4 847 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 SYNGAP1Q96PV0 1343 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.62□□□□□ -0.87
GGA3-222ENST00000621217 RTN2O75298 545 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 PPP1R37O75864 691 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 STAM2O75886 525 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 TMEM253P0C7T8 217 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 SUPT20HL2P0C7V6 817 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 TROVE2P10155 538 aaKnown RBP eCLIP9.62□□□□□ -0.87
GGA3-222ENST00000621217 RARBP10826 455 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 ADCYAP1R1P41586 468 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 KRT17Q04695 432 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 ZCWPW2Q504Y3 356 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 ZNF667Q5HYK9 610 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 SCFD2Q8WU76 684 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 SREK1Q8WXA9 508 aaKnown RBP9.62□□□□□ -0.87
GGA3-222ENST00000621217 DTNBP1Q96EV8 351 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 THEGQ9P2T0 379 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 USP54Q70EL1 1684 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 EIF3HO15372 352 aaKnown RBP eCLIP9.62□□□□□ -0.874e-7■■■■□ 20.1
GGA3-222ENST00000621217 CCNE2O96020 404 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 ALDH5A1P51649 535 aaPredicted RBP9.62□□□□□ -0.87
GGA3-222ENST00000621217 ARPP19P56211 112 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 PPP2R2AP63151 447 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 NUGGCQ68CJ6 796 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 SLFN12LQ6IEE8 588 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 AENQ8WTP8 325 aaKnown RBP9.62□□□□□ -0.87
GGA3-222ENST00000621217 HSPH1Q92598 858 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 RPS6KC1Q96S38 1066 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 CCT8L2Q96SF2 557 aa9.62□□□□□ -0.87
GGA3-222ENST00000621217 MRPL4Q9BYD3 311 aaKnown RBP9.62□□□□□ -0.87
GGA3-222ENST00000621217 BAG2O95816 211 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 BASP1P80723 227 aaKnown RBP9.61□□□□□ -0.87
GGA3-222ENST00000621217 ALCAMQ13740 583 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 CLUL1Q15846 466 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 OR6B2Q6IFH4 312 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 CASC4Q6P4E1 433 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 SV2AQ7L0J3 742 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 MSL3Q8N5Y2 521 aaKnown RBP9.61□□□□□ -0.87
GGA3-222ENST00000621217 GSDMBQ8TAX9 411 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.873e-6■■□□□ 13.9
GGA3-222ENST00000621217 FAM167BQ9BTA0 163 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 BEGAINQ9BUH8 593 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 ISCUQ9H1K1 167 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 NGRNQ9NPE2 291 aaKnown RBP9.61□□□□□ -0.87
GGA3-222ENST00000621217 HESX1Q9UBX0 185 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 ASB14A6NK59 587 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 TBC1D12O60347 775 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 MAP3K6O95382 1288 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 HLA-DRAP01903 254 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 ADORA2AP29274 412 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 FLT3P36888 993 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 PSMC4P43686 418 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 TMED1Q13445 227 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 CUL3Q13618 768 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 KIF22Q14807 665 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 KYNUQ16719 465 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 SMTNL2Q2TAL5 461 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 TTMPQ5BVD1 217 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 GNASQ5JWF2 1037 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 SUGP1Q8IWZ8 645 aaKnown RBP9.61□□□□□ -0.87
GGA3-222ENST00000621217 CPB2Q96IY4 423 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 PIN4Q9Y237 131 aaKnown RBP9.61□□□□□ -0.87
GGA3-222ENST00000621217 MIF4GDA9UHW6 222 aaKnown RBP9.61□□□□□ -0.87
GGA3-222ENST00000621217 GRAP2O75791 330 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 UBA1P22314 1058 aaKnown RBP9.61□□□□□ -0.87
GGA3-222ENST00000621217 RRM1P23921 792 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 MDH1P40925 334 aaKnown RBP9.61□□□□□ -0.87
GGA3-222ENST00000621217 PTGER2P43116 358 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 PHKA2P46019 1235 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 PPATQ06203 517 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 PPP2R5CQ13362 524 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 HSDL1Q3SXM5 330 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 APBB1IPQ7Z5R6 666 aaPredicted RBP9.61□□□□□ -0.87
GGA3-222ENST00000621217 CFAP61Q8NHU2 1237 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 HVCN1Q96D96 273 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 FAM167AQ96KS9 214 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 PORCNQ9H237 461 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 Q9H521 79 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 SAYSD1Q9NPB0 183 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 BTBD7Q9P203 1132 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 NR2E1Q9Y466 385 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 PFASO15067 1338 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 IRS2Q9Y4H2 1338 aa9.61□□□□□ -0.87
GGA3-222ENST00000621217 CNTNAP1P78357 1384 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms