RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 FBXL5Q9UKA1 691 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 CAPN11Q9UMQ6 739 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 DAAM1Q9Y4D1 1078 aa8.65□□□□□ -1.02
CPNE3-209ENST00000620393 ANO9A1A5B4 782 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 GOLGA6L6A8MZA4 724 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 AKR1B15C9JRZ8 316 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 RNF225M0QZC1 329 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 PIRO00625 290 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 EPHB6O15197 1021 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 HOXA2O43364 376 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 FGBP02675 491 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 GYPCP04921 128 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 TPM1P09493 284 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 ACRP10323 421 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 UCHL3P15374 230 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 TRIM21P19474 475 aaKnown RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 IBSPP21815 317 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 LRPAP1P30533 357 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 ATICP31939 592 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 MLH1P40692 756 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 AFF1P51825 1210 aaKnown RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 GUCY2FP51841 1108 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 MYL6P60660 151 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 APBA1Q02410 837 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 NOMO2Q5JPE7 1267 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 GLRA4Q5JXX5 417 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 CCDC186Q7Z3E2 898 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 NPAS4Q8IUM7 802 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 CCDC150Q8NCX0 1101 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 TAF4BQ92750 862 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 TATDN2Q93075 761 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 TOP1MTQ969P6 601 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 C18orf25Q96B23 403 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 FAXDC2Q96IV6 333 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 FAM81BQ96LP2 452 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 NT5C1BQ96P26 610 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 RPS6KC1Q96S38 1066 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 PI4K2AQ9BTU6 479 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 NAA15Q9BXJ9 866 aaKnown RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 XYLT2Q9H1B5 865 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 GANQ9H2C0 597 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 VRTNQ9H8Y1 702 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 UBE2TQ9NPD8 197 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 CEP72Q9P209 647 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 APEX2Q9UBZ4 518 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 DNAJC12Q9UKB3 198 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 ITGA11Q9UKX5 1188 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 LRFN2Q9ULH4 789 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 AGAP1Q9UPQ3 857 aa8.64□□□□□ -1.03
CPNE3-209ENST00000620393 LUC7L2Q9Y383 392 aaKnown RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 R3HCC1Q9Y3T6 440 aaKnown RBP8.64□□□□□ -1.03
CPNE3-209ENST00000620393 BAIAP3O94812 1187 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 STAU1O95793 577 aaKnown RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 ASS1P00966 412 aaKnown RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 POMCP01189 267 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 ITGB3P05106 788 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 KRT19P08727 400 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 FGFR1P11362 822 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 RFX1P22670 979 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 POLR2BP30876 1174 aaKnown RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 CASP14P31944 242 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 RPL9P32969 192 aaKnown RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 KRT9P35527 623 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 PBX2P40425 430 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 PIK3CAP42336 1068 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 FXR1P51114 621 aaKnown RBP eCLIP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 SCNN1GP51170 649 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 GSDMDP57764 484 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 POLR2FP61218 127 aaKnown RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 ZBED6P86452 979 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 FPGSQ05932 587 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 SOX4Q06945 474 aaPredicted RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 LRMPQ12912 555 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 GRIK3Q13003 919 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 NAB2Q15742 525 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 CLLU1OSQ5K130 101 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 PPP1R15BQ5SWA1 713 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 C9orf57Q5W0N0 161 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 IQCEQ6IPM2 695 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 ZNF365Q70YC5 407 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 ENOSF1Q7L5Y1 443 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 CACNA2D4Q7Z3S7 1137 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 TMEM130Q8N3G9 435 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 LRRC52Q8N7C0 313 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 TC2NQ8N9U0 490 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 ZNF397Q8NF99 534 aaPredicted RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 OR8K1Q8NGG5 319 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 URGCPQ8TCY9 931 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 HELQQ8TDG4 1101 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 RSPH1Q8WYR4 309 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 BAP1Q92560 729 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 CASD1Q96PB1 797 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 STK33Q9BYT3 514 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 IMPG2Q9BZV3 1241 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 NUCKS1Q9H1E3 243 aaKnown RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 APOBEC3GQ9HC16 384 aaKnown RBP8.63□□□□□ -1.03
CPNE3-209ENST00000620393 TUBGCP4Q9UGJ1 667 aa8.63□□□□□ -1.03
CPNE3-209ENST00000620393 MYO6Q9UM54 1294 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms