RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 GHRP10912 638 aa16.77■□□□□ 0.27
CPSF1-213ENST00000620219 FECHP22830 423 aa16.77■□□□□ 0.27
CPSF1-213ENST00000620219 ADORA2BP29275 332 aa16.77■□□□□ 0.27
CPSF1-213ENST00000620219 ATN1P54259 1190 aaPredicted RBP16.77■□□□□ 0.27
CPSF1-213ENST00000620219 GYS2P54840 703 aa16.77■□□□□ 0.27
CPSF1-213ENST00000620219 RBP5P82980 135 aa16.77■□□□□ 0.27
CPSF1-213ENST00000620219 ABI1Q8IZP0 508 aa16.77■□□□□ 0.27
CPSF1-213ENST00000620219 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.77■□□□□ 0.27
CPSF1-213ENST00000620219 FAM193BQ96PV7 902 aaPredicted RBP16.77■□□□□ 0.27
CPSF1-213ENST00000620219 NAP1L3Q99457 506 aaPredicted RBP16.77■□□□□ 0.27
CPSF1-213ENST00000620219 NRCAMQ92823 1304 aa16.77■□□□□ 0.27
CPSF1-213ENST00000620219 PGRMC1O00264 195 aaKnown RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 RNF180Q86T96 592 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 TMEM192Q8IY95 271 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 UBA3Q8TBC4 463 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 CISHQ9NSE2 258 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 C22orf31O95567 290 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 CST3P01034 146 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 KREMEN1Q96MU8 473 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 RBM12Q9NTZ6 932 aaKnown RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 KLHL11Q9NVR0 708 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 GABRQQ9UN88 632 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 TRIM17Q9Y577 477 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 SMIM23A6NLE4 172 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 ITGBL1O95965 494 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 EIF4BP23588 611 aaKnown RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 YY1P25490 414 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 WDR49Q8IV35 697 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 MIS12Q9H081 205 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 CCDC113Q9H0I3 377 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 DDX47Q9H0S4 455 aaKnown RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 IL18RAPO95256 599 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 IFNB1P01574 187 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 DYNLT1P63172 113 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 CYP4A22Q5TCH4 519 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 TAS1R3Q7RTX0 852 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 C1orf131Q8NDD1 294 aaKnown RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 MAGOHBQ96A72 148 aaKnown RBP16.76■□□□□ 0.27
CPSF1-213ENST00000620219 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 EPB41L5Q9HCM4 733 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 SIX2Q9NPC8 291 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 ASIC3Q9UHC3 531 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 SLC45A1Q9Y2W3 748 aa16.76■□□□□ 0.27
CPSF1-213ENST00000620219 GPR25O00155 361 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 SOCS7O14512 581 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 HUS1O60921 280 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 HEXIM1O94992 359 aaKnown RBP16.75■□□□□ 0.27
CPSF1-213ENST00000620219 RDXP35241 583 aaKnown RBP16.75■□□□□ 0.27
CPSF1-213ENST00000620219 HDXQ7Z353 690 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 C12orf56Q8IXR9 622 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 MTG1Q9BT17 334 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-213ENST00000620219 TLR10Q9BXR5 811 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 VPS18Q9P253 973 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 MED7O43513 233 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 GRAP2O75791 330 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 KIF4AO95239 1232 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 ZACNQ401N2 412 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 SPOUT1Q5T280 376 aaKnown RBP16.75■□□□□ 0.27
CPSF1-213ENST00000620219 LNX1Q8TBB1 728 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-213ENST00000620219 ZWILCHQ9H900 591 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 MRPL47Q9HD33 250 aaKnown RBP16.75■□□□□ 0.27
CPSF1-213ENST00000620219 UMODL1Q5DID0 1318 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 GRID2IPA4D2P6 1211 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 ARPP19P56211 112 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 CDR2Q01850 454 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 MOGSQ13724 837 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 NBPF20Q3BBV1 942 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 ARHGEF26Q96DR7 871 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 PCSK1NQ9UHG2 260 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 RASAL2Q9UJF2 1139 aa16.75■□□□□ 0.27
CPSF1-213ENST00000620219 UNCXA6NJT0 531 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 PSMC1P62191 440 aaKnown RBP16.74■□□□□ 0.27
CPSF1-213ENST00000620219 BRD3Q15059 726 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 HAUS1Q96CS2 278 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 MAK16Q9BXY0 300 aaKnown RBP16.74■□□□□ 0.27
CPSF1-213ENST00000620219 CCDC151A5D8V7 595 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 OAS2P29728 719 aaKnown RBP16.74■□□□□ 0.27
CPSF1-213ENST00000620219 EPS8L1Q8TE68 723 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 HDAC7Q8WUI4 952 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 RNF25Q96BH1 459 aaPredicted RBP16.74■□□□□ 0.27
CPSF1-213ENST00000620219 ALG6Q9Y672 507 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 RNF8O76064 485 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 IFT20Q8IY31 132 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 NGRNQ9NPE2 291 aaKnown RBP16.74■□□□□ 0.27
CPSF1-213ENST00000620219 UTP11Q9Y3A2 253 aaKnown RBP16.74■□□□□ 0.27
CPSF1-213ENST00000620219 MSCO60682 206 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 GJB6O95452 261 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 RRM1P23921 792 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 CDC42EP1Q00587 391 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 RSRC2Q7L4I2 434 aaKnown RBP16.74■□□□□ 0.27
CPSF1-213ENST00000620219 TPCN2Q8NHX9 752 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 MAF1Q9H063 256 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 ANKZF1Q9H8Y5 726 aa16.74■□□□□ 0.27
CPSF1-213ENST00000620219 TMEM253P0C7T8 217 aa16.73■□□□□ 0.27
CPSF1-213ENST00000620219 TUBB4BP68371 445 aa16.73■□□□□ 0.27
CPSF1-213ENST00000620219 PAPD7Q5XG87 772 aaKnown RBP16.73■□□□□ 0.27
CPSF1-213ENST00000620219 RNF34Q969K3 372 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms